Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 NCOR1P1-202ENST00000486162 291 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC093278.1-201ENST00000494700 600 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 MTCYBP37-201ENST00000510642 1133 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP385-201ENST00000515947 110 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP217-201ENST00000515959 91 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP315-201ENST00000516340 116 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 snoZ278.1-201ENST00000517059 112 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP312-201ENST00000517068 116 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC068339.2-201ENST00000534395 618 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC087894.1-201ENST00000538359 518 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC107954.1-201ENST00000565906 727 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC122134.1-202ENST00000569111 1201 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC025588.3-201ENST00000604182 274 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC112230.1-201ENST00000604342 547 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL590392.1-201ENST00000604960 446 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AP000238.1-201ENST00000608759 426 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AP005137.2-201ENST00000609238 400 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 MIR6867-201ENST00000610636 67 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL512427.1-201ENST00000618593 349 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 MIR492-201ENST00000638676 116 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL356274.2-201ENST00000624379 3752 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC026951.1-201ENST00000559530 2459 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 ZNF37BP-203ENST00000452306 1352 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL157700.1-201ENST00000561973 1432 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RN7SKP227-201ENST00000364445 330 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RNU6-629P-201ENST00000384061 103 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RNU1-13P-201ENST00000384499 162 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL139098.1-201ENST00000407291 389 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RNU4-78P-201ENST00000410940 126 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL356968.1-201ENST00000416622 474 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL356095.1-201ENST00000417217 199 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC005345.1-201ENST00000431868 217 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 NEK4P1-201ENST00000433383 879 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 KCTD10P1-201ENST00000434203 625 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL356276.2-201ENST00000435919 558 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 TBCAP1-201ENST00000436520 327 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC092754.2-201ENST00000463506 460 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC022034.3-201ENST00000471393 478 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RPS4XP15-201ENST00000489210 795 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC022695.1-201ENST00000522089 237 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 IGHV3-76-201ENST00000522465 295 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 OR4A45P-201ENST00000529954 901 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC010198.2-201ENST00000550612 259 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC044913.1-201ENST00000557200 430 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 MIR4697-201ENST00000582977 78 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC015726.1-201ENST00000602353 681 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AL354976.1-201ENST00000613843 387 ntBASIC2.62□□□□□ -1.99
HLA-DQA1P01909 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1P01909 AC048347.1-201ENST00000624621 427 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms