Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL049874.4-201ENST00000557593 255 ntBASIC2.74□□□□□ -1.97
TNFP01375 MIR3162-201ENST00000581818 82 ntBASIC2.74□□□□□ -1.97
TNFP01375 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.74□□□□□ -1.97
TNFP01375 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.74□□□□□ -1.97
TNFP01375 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFP01375 AC004972.1-201ENST00000623934 2209 ntBASIC2.74□□□□□ -1.97
TNFP01375 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
TNFP01375 AL079305.1-201ENST00000623159 3008 ntBASIC2.74□□□□□ -1.97
TNFP01375 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFP01375 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.73□□□□□ -1.97
TNFP01375 AC092593.1-201ENST00000515413 1815 ntBASIC2.73□□□□□ -1.97
TNFP01375 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFP01375 MIR148B-201ENST00000362252 99 ntBASIC2.73□□□□□ -1.97
TNFP01375 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TNFP01375 MIR196B-201ENST00000384852 84 ntBASIC2.73□□□□□ -1.97
TNFP01375 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
TNFP01375 HMGB1P10-201ENST00000395823 563 ntBASIC2.73□□□□□ -1.97
TNFP01375 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFP01375 VN1R31P-201ENST00000417498 730 ntBASIC2.73□□□□□ -1.97
TNFP01375 NUP35P1-201ENST00000422734 947 ntBASIC2.73□□□□□ -1.97
TNFP01375 TRIAP1P1-201ENST00000427062 225 ntBASIC2.73□□□□□ -1.97
TNFP01375 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFP01375 MTCO1P43-201ENST00000431831 488 ntBASIC2.73□□□□□ -1.97
TNFP01375 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.73□□□□□ -1.97
TNFP01375 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.73□□□□□ -1.97
TNFP01375 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.73□□□□□ -1.97
TNFP01375 RN7SL432P-201ENST00000484057 298 ntBASIC2.73□□□□□ -1.97
TNFP01375 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 HAUS1P1-201ENST00000505275 832 ntBASIC2.73□□□□□ -1.97
TNFP01375 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
TNFP01375 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFP01375 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFP01375 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFP01375 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.73□□□□□ -1.97
TNFP01375 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
TNFP01375 AL390838.2-201ENST00000602394 274 ntBASIC2.73□□□□□ -1.97
TNFP01375 AC016877.3-201ENST00000606778 504 ntBASIC2.73□□□□□ -1.97
TNFP01375 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFP01375 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
TNFP01375 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFP01375 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
TNFP01375 RNU6-225P-201ENST00000384613 103 ntBASIC2.72□□□□□ -1.97
TNFP01375 RPL21P3-201ENST00000395517 478 ntBASIC2.72□□□□□ -1.97
TNFP01375 AL360182.1-201ENST00000397433 468 ntBASIC2.72□□□□□ -1.97
TNFP01375 PRELID3BP11-201ENST00000414230 479 ntBASIC2.72□□□□□ -1.97
TNFP01375 NDUFB4P5-201ENST00000415445 361 ntBASIC2.72□□□□□ -1.97
TNFP01375 AC012498.1-201ENST00000424037 437 ntBASIC2.72□□□□□ -1.97
TNFP01375 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
TNFP01375 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 AL592437.1-201ENST00000443781 492 ntBASIC2.72□□□□□ -1.97
TNFP01375 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 RPL21P41-201ENST00000459863 264 ntBASIC2.72□□□□□ -1.97
TNFP01375 AC146507.2-201ENST00000460608 476 ntBASIC2.72□□□□□ -1.97
TNFP01375 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 RPL31P50-201ENST00000471002 296 ntBASIC2.72□□□□□ -1.97
TNFP01375 AC010627.1-201ENST00000503819 1294 ntBASIC2.72□□□□□ -1.97
TNFP01375 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TNFP01375 SNORA31.21-201ENST00000517180 77 ntBASIC2.72□□□□□ -1.97
TNFP01375 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFP01375 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 OR4H12P-201ENST00000556269 907 ntBASIC2.72□□□□□ -1.97
TNFP01375 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.72□□□□□ -1.97
TNFP01375 MIR4672-201ENST00000583126 81 ntBASIC2.72□□□□□ -1.97
TNFP01375 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFP01375 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TNFP01375 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 AC010338.1-201ENST00000621823 717 ntBASIC2.72□□□□□ -1.97
TNFP01375 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFP01375 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TNFP01375 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFP01375 AL136360.1-201ENST00000503377 1900 ntBASIC2.72□□□□□ -1.97
TNFP01375 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
TNFP01375 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
TNFP01375 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TNFP01375 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
TNFP01375 RNU4-7P-201ENST00000364758 141 ntBASIC2.71□□□□□ -1.98
TNFP01375 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
TNFP01375 RNA5SP21-201ENST00000410917 96 ntBASIC2.71□□□□□ -1.98
TNFP01375 XKRYP4-201ENST00000414395 483 ntBASIC2.71□□□□□ -1.98
TNFP01375 CBX1P4-201ENST00000439415 457 ntBASIC2.71□□□□□ -1.98
TNFP01375 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.71□□□□□ -1.98
TNFP01375 XKRYP5-201ENST00000449659 483 ntBASIC2.71□□□□□ -1.98
TNFP01375 AC108938.1-201ENST00000451204 136 ntBASIC2.71□□□□□ -1.98
TNFP01375 AL109933.2-201ENST00000452651 260 ntBASIC2.71□□□□□ -1.98
TNFP01375 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.71□□□□□ -1.98
TNFP01375 RPL5P23-201ENST00000496040 868 ntBASIC2.71□□□□□ -1.98
TNFP01375 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.71□□□□□ -1.98
TNFP01375 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFP01375 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms