Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 CDC42P1-201ENST00000456658 548 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC010401.1-201ENST00000463867 348 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC078785.3-201ENST00000476607 425 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 MTCO2P9-201ENST00000503214 694 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN9O95484 AP004371.1-201ENST00000525240 214 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC103843.2-201ENST00000530523 682 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 OR8K4P-201ENST00000534608 872 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN9O95484 MIR4789-201ENST00000577469 82 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC005412.1-201ENST00000580812 1049 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC124283.4-201ENST00000581815 456 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC133794.1-201ENST00000602731 914 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AL160281.1-201ENST00000605307 311 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC013468.1-201ENST00000608680 598 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC105227.2-201ENST00000615075 605 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC073592.7-201ENST00000623659 507 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC020923.1-201ENST00000624021 917 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 AC004777.1-201ENST00000624317 287 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 MTND5P31-201ENST00000419366 1374 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 MTCO1P4-201ENST00000520516 1409 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 ZNF285B-201ENST00000561698 1767 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN9O95484 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CLDN9O95484 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
CLDN9O95484 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN9O95484 AL133383.2-201ENST00000622958 2336 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN9O95484 AL365440.1-201ENST00000436135 2167 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN9O95484 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN9O95484 AL645937.1-201ENST00000641739 1652 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CLDN9O95484 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN9O95484 AL592494.2-201ENST00000425455 1548 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN9O95484 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN9O95484 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 RNU6-921P-201ENST00000384361 107 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 SFR1P1-201ENST00000403720 688 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MTCO3P31-201ENST00000405526 789 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 RNU4-78P-201ENST00000410940 126 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 USP9YP19-201ENST00000412165 485 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 Z99755.1-201ENST00000414048 380 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC009237.2-201ENST00000421358 284 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC233981.1-201ENST00000423224 461 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MTCO2P1-201ENST00000424648 477 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 UBE2D3P3-201ENST00000426992 425 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 USP9YP31-201ENST00000431405 881 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 RRM2P4-201ENST00000441721 562 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 MOB1AP2-201ENST00000446060 614 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 Z99714.1-201ENST00000450463 807 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC011352.3-201ENST00000505162 593 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC110768.1-201ENST00000509222 400 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 RNU6-334P-201ENST00000517072 102 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 AP001636.2-201ENST00000525517 696 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 OR4A45P-201ENST00000529954 901 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN9O95484 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN9O95484 AC093510.2-201ENST00000562820 896 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC074051.3-201ENST00000570238 358 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MTCO1P40-201ENST00000574371 625 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MIR4444-1-201ENST00000581696 74 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 MIR4444-2-201ENST00000584390 74 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC067852.3-201ENST00000589177 561 ntBASIC3.31□□□□□ -1.88
CLDN9O95484 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN9O95484 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms