Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 IGHV3-32-201ENST00000519182 355 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AP003730.1-201ENST00000524605 285 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
LMX1BO60663 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LMX1BO60663 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 PDCD5P1-201ENST00000543528 309 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC025884.1-201ENST00000556034 378 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC034105.4-201ENST00000568304 277 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.74□□□□□ -1.81
LMX1BO60663 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC079587.1-201ENST00000603846 277 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC069304.2-201ENST00000605154 435 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 AC116165.2-201ENST00000616705 206 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC120349.2-201ENST00000625002 298 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 MIR3653-201ENST00000625572 110 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 AC068137.3-201ENST00000639191 341 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 AC073869.6-201ENST00000640656 341 ntBASIC3.74□□□□□ -1.81
LMX1BO60663 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMX1BO60663 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.74□□□□□ -1.81
LMX1BO60663 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LMX1BO60663 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LMX1BO60663 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC011266.1-201ENST00000624119 3569 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 OR52B1P-201ENST00000316506 909 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 MIR331-201ENST00000362302 94 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 RNU4-91P-201ENST00000364778 135 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 RNU6-348P-201ENST00000384386 107 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 RNU6-225P-201ENST00000384613 103 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 AL450992.3-201ENST00000413192 568 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 MTCYBP38-201ENST00000417160 1123 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC010975.2-201ENST00000427781 588 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 Z95327.1-201ENST00000446082 482 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 MTCO3P11-201ENST00000455103 774 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 RPL18AP17-201ENST00000455326 198 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LMX1BO60663 CFTRP1-201ENST00000456646 183 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 RNA5SP269-201ENST00000459032 137 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 SNORA84-201ENST00000459229 133 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC104164.2-201ENST00000496953 495 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 SETP14-201ENST00000497538 873 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC025554.1-201ENST00000505641 188 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 ARL2BPP4-201ENST00000506854 471 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC113430.1-201ENST00000506872 718 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 HMGB1P28-201ENST00000507778 552 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 CDC42P4-201ENST00000510507 563 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC006499.6-201ENST00000511169 607 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 MTND4LP26-201ENST00000518144 282 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 DUXAP2-201ENST00000519198 589 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC008562.1-201ENST00000521763 330 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 COX6B1P6-201ENST00000522347 255 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.73□□□□□ -1.81
LMX1BO60663 AP001207.1-201ENST00000524051 481 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC069240.1-201ENST00000548774 375 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.73□□□□□ -1.81
LMX1BO60663 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.73□□□□□ -1.81
LMX1BO60663 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC012065.4-201ENST00000602445 679 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 NDUFA8P1-201ENST00000605525 367 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 MIR432-201ENST00000606207 94 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC090948.2-201ENST00000607363 564 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC108747.1-201ENST00000609508 535 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC015813.4-201ENST00000610469 179 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AC064801.1-201ENST00000612025 407 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AL355073.2-201ENST00000612106 557 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.73□□□□□ -1.81
LMX1BO60663 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LMX1BO60663 AL356121.2-201ENST00000624715 780 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 AL160394.1-201ENST00000624765 724 ntBASIC3.73□□□□□ -1.81
LMX1BO60663 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.73□□□□□ -1.81
LMX1BO60663 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LMX1BO60663 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LMX1BO60663 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LMX1BO60663 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms