Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX3O60493 AC023050.2-201ENST00000544968 387 ntBASIC3.68□□□□□ -1.82
SNX3O60493 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.68□□□□□ -1.82
SNX3O60493 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX3O60493 AC006960.3-201ENST00000561845 705 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX3O60493 AC124312.4-201ENST00000605533 310 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RNA5SP108-201ENST00000605921 117 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AL450489.1-201ENST00000612071 468 ntBASIC3.68□□□□□ -1.82
SNX3O60493 MIR6780A-201ENST00000615089 68 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC140725.3-201ENST00000616193 880 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC009159.2-201ENST00000617603 606 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AP000484.1-201ENST00000620067 1252 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
SNX3O60493 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SNX3O60493 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
SNX3O60493 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX3O60493 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
SNX3O60493 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RNU6-621P-201ENST00000364752 109 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RNU6-730P-201ENST00000383954 104 ntBASIC3.67□□□□□ -1.82
SNX3O60493 TAF9BP1-201ENST00000396646 746 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RNA5SP31-201ENST00000411144 127 ntBASIC3.67□□□□□ -1.82
SNX3O60493 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 HMGB3P20-201ENST00000417997 600 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RPL17P36-201ENST00000420302 549 ntBASIC3.67□□□□□ -1.82
SNX3O60493 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 TBCAP1-201ENST00000436520 327 ntBASIC3.67□□□□□ -1.82
SNX3O60493 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 AC127537.2-201ENST00000439258 465 ntBASIC3.67□□□□□ -1.82
SNX3O60493 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 MTND3P1-201ENST00000441336 220 ntBASIC3.67□□□□□ -1.82
SNX3O60493 MTCYBP11-201ENST00000447254 1109 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RPL39P6-201ENST00000448289 150 ntBASIC3.67□□□□□ -1.82
SNX3O60493 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 AC099563.1-201ENST00000456086 418 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RPL23AP24-201ENST00000458203 385 ntBASIC3.67□□□□□ -1.82
SNX3O60493 PLGLA-201ENST00000465668 449 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RPS4XP22-201ENST00000480755 780 ntBASIC3.67□□□□□ -1.82
SNX3O60493 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 RPL7P38-201ENST00000488396 739 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC012170.1-201ENST00000495139 359 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 OR5H5P-201ENST00000503164 928 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC093767.1-201ENST00000504523 156 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC104090.1-201ENST00000506341 1171 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC021146.8-201ENST00000507455 733 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC034244.1-201ENST00000507687 207 ntBASIC3.67□□□□□ -1.82
SNX3O60493 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RNU5A-4P-201ENST00000516588 111 ntBASIC3.67□□□□□ -1.82
SNX3O60493 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.67□□□□□ -1.82
SNX3O60493 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX3O60493 AC008507.1-201ENST00000587506 734 ntBASIC3.67□□□□□ -1.82
SNX3O60493 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX3O60493 SNORA62.6-201ENST00000606322 83 ntBASIC3.67□□□□□ -1.82
SNX3O60493 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 U6.101-201ENST00000637707 76 ntBASIC3.67□□□□□ -1.82
SNX3O60493 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
SNX3O60493 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX3O60493 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX3O60493 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 ZNF37BP-203ENST00000452306 1352 ntBASIC3.66□□□□□ -1.82
SNX3O60493 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 FAM133CP-201ENST00000332869 704 ntBASIC3.66□□□□□ -1.82
SNX3O60493 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 RNVU1-3-201ENST00000364313 161 ntBASIC3.66□□□□□ -1.82
SNX3O60493 SNORD82-201ENST00000365530 70 ntBASIC3.66□□□□□ -1.82
SNX3O60493 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms