Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC104308.1-201ENST00000454621 333 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC104629.2-201ENST00000468627 598 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 RPL23AP11-201ENST00000475260 469 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 AC006445.1-201ENST00000491925 405 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 OR2A20P-203ENST00000498397 1268 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.46□□□□□ -2.02
SDCBPO00560 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.46□□□□□ -2.02
SDCBPO00560 MTND4LP22-201ENST00000508209 276 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.46□□□□□ -2.02
SDCBPO00560 RNA5SP76-201ENST00000516277 87 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 RN7SKP244-201ENST00000516513 307 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 SYF2P1-201ENST00000550658 413 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 MTCO3P13-201ENST00000577757 781 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC006504.3-201ENST00000586818 523 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC023043.3-201ENST00000593113 385 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 HMGN2P28-201ENST00000606102 262 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 AL627309.6-201ENST00000606857 840 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.46□□□□□ -2.02
SDCBPO00560 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.46□□□□□ -2.02
SDCBPO00560 AL590240.3-201ENST00000621416 943 ntBASIC2.46□□□□□ -2.02
SDCBPO00560 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.46□□□□□ -2.02
SDCBPO00560 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.46□□□□□ -2.02
SDCBPO00560 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SDCBPO00560 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SDCBPO00560 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
SDCBPO00560 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SDCBPO00560 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 MTND5P3-201ENST00000438536 1800 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 GSTA8P-201ENST00000404253 637 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 RNU2-6P-201ENST00000411404 190 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 RPL7P8-201ENST00000411964 730 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC241520.1-201ENST00000422654 1099 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC022018.1-201ENST00000430685 241 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 VDAC1P3-201ENST00000434069 851 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.45□□□□□ -2.02
SDCBPO00560 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 RPS27P5-201ENST00000444247 244 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 RPL27AP5-201ENST00000469428 449 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC017007.3-201ENST00000479865 435 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 AC021087.2-201ENST00000504656 1203 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 ATG10-AS1-201ENST00000504846 648 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 SNORA26.10-201ENST00000516427 141 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 FAM60DP-201ENST00000524174 632 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC010735.1-201ENST00000567305 1026 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 MIR548Y-201ENST00000582739 110 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 BNIP3P11-201ENST00000603878 563 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC091488.1-201ENST00000604239 660 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 MIR92B-201ENST00000607575 96 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC084036.1-201ENST00000609190 508 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AL162574.2-201ENST00000614618 657 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC245389.2-201ENST00000616023 576 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC243756.2-201ENST00000618406 463 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 AC242843.1-201ENST00000618702 573 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 Z99129.2-201ENST00000619967 314 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.45□□□□□ -2.02
SDCBPO00560 AC007256.1-201ENST00000392253 2765 ntBASIC2.45□□□□□ -2.02
SDCBPO00560 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
SDCBPO00560 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.45□□□□□ -2.02
SDCBPO00560 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SDCBPO00560 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.45□□□□□ -2.02
SDCBPO00560 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.44□□□□□ -2.02
SDCBPO00560 AC110774.1-201ENST00000623567 2018 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SDCBPO00560 RNA5SP171-201ENST00000391071 115 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 RPL5P18-201ENST00000406671 891 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 RN7SKP220-201ENST00000410611 288 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 AL139281.1-201ENST00000422120 335 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AC023347.2-201ENST00000433994 462 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.44□□□□□ -2.02
SDCBPO00560 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SDCBPO00560 MUPP-201ENST00000438111 566 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 MED6P1-201ENST00000439659 713 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 MTCYBP12-201ENST00000440559 1134 ntBASIC2.44□□□□□ -2.02
SDCBPO00560 HSPE1P28-201ENST00000443139 211 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms