Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-501P-201ENST00000364072 100 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 RNU6-878P-201ENST00000384578 110 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 SNORD116-4-201ENST00000384733 96 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AC025750.1-201ENST00000399891 379 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 MTCYBP36-201ENST00000404146 440 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AL121834.1-202ENST00000404494 277 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AL138880.1-201ENST00000405824 642 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 MTATP6P27-201ENST00000416987 621 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 EPS15P1-201ENST00000448836 336 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXN3O00409 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 HIGD1AP10-201ENST00000527837 282 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 PHBP17-201ENST00000528576 541 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN3O00409 AP001004.1-201ENST00000582468 324 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 RPL12P25-202ENST00000598100 674 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AC097468.3-201ENST00000607956 456 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AL136295.6-201ENST00000610486 658 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 AL158063.1-201ENST00000615349 536 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
FOXN3O00409 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN3O00409 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FOXN3O00409 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN3O00409 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FOXN3O00409 RNU6-398P-201ENST00000384143 109 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 MIR129-1-201ENST00000384972 72 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 CYB5AP4-201ENST00000396692 399 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 MTND4LP20-201ENST00000402379 270 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 RNU2-15P-201ENST00000410692 191 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 RNU4-78P-201ENST00000410940 126 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN3O00409 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC012065.2-201ENST00000421295 375 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AL356387.2-201ENST00000422272 243 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 RPS27AP7-201ENST00000422792 455 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC005517.2-201ENST00000424673 553 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC244035.1-201ENST00000430042 390 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 DLGAP5P1-201ENST00000430307 464 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 USP9YP14-201ENST00000430663 563 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXN3O00409 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 RPL23AP33-201ENST00000442301 452 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXN3O00409 ELOCP30-201ENST00000447108 299 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 MTND4LP3-201ENST00000468320 276 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 HMGB1P36-201ENST00000487709 576 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 RN7SL812P-201ENST00000493791 279 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXN3O00409 AC006499.5-201ENST00000505037 514 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC111000.3-201ENST00000508057 576 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 Y_RNA.695-201ENST00000516715 107 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXN3O00409 HSPA8P13-201ENST00000523715 472 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 AL352979.3-201ENST00000553515 247 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC007424.1-203ENST00000554613 687 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC068831.4-201ENST00000556118 109 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 PCMTD1P2-201ENST00000565017 355 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC103987.3-201ENST00000582071 292 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXN3O00409 AL031985.2-201ENST00000600955 480 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AP001981.2-201ENST00000603241 418 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 RPL23AP92-201ENST00000603609 255 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC112230.1-201ENST00000604342 547 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC105429.2-201ENST00000610567 517 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC007546.1-201ENST00000619452 559 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC004009.2-201ENST00000623016 728 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 AC012618.3-205ENST00000637896 1496 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN3O00409 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXN3O00409 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms