Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORD53-201ENST00000579969 78 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RN7SL339P-201ENST00000580597 296 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC112503.2-201ENST00000609005 552 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL137847.3-201ENST00000611521 109 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC245884.12-201ENST00000615364 59 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR6778-201ENST00000617912 73 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC018755.4-201ENST00000619715 454 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-156P-201ENST00000621869 107 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC112484.5-201ENST00000624189 228 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 SAGE4P-201ENST00000442271 3381 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC007342.9-201ENST00000623877 1385 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL049737.1-201ENST00000413920 1403 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC011460.1-201ENST00000636268 1834 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 IARS-201ENST00000375627 697 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL32P23-201ENST00000397237 405 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL7P25-201ENST00000404151 721 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL513331.1-201ENST00000411908 397 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC007394.1-201ENST00000421941 531 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL035458.1-201ENST00000433096 585 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL356276.2-201ENST00000435919 558 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL23AP74-201ENST00000437246 471 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 PGBD4P3-201ENST00000440731 581 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 IFNA11P-201ENST00000446352 526 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 MRPL50P4-201ENST00000446432 475 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL162389.1-201ENST00000449233 177 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 SNORD105B-201ENST00000458770 79 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP310-201ENST00000459084 116 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC133134.1-201ENST00000466800 359 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC015908.1-201ENST00000478739 476 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS3AP43-201ENST00000479743 781 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC004815.1-201ENST00000484185 331 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC004453.1-201ENST00000487895 408 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL7P51-201ENST00000490532 749 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC091167.1-201ENST00000492017 396 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS4XP14-201ENST00000493072 781 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC090568.1-201ENST00000509499 856 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC113155.1-201ENST00000511141 769 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 ISCA1P3-201ENST00000577104 373 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 TPMTP1-201ENST00000592307 737 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS15AP11-201ENST00000594193 385 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL23AP92-201ENST00000603609 255 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR6840-201ENST00000611937 71 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC114781.5-201ENST00000615297 108 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AL512356.3-201ENST00000623005 461 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 AC090506.2-201ENST00000624521 419 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 CU459211.1-201ENST00000635667 749 ntBASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
CHKB-CPT1BH3BT56 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC087565.3-202ENST00000642085 1603 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 OR6K3-202ENST00000368146 996 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR512-1-201ENST00000384913 84 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP229-201ENST00000410809 99 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AC011242.1-201ENST00000433596 1158 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MED6P1-201ENST00000439659 713 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AL590664.1-201ENST00000448065 339 ntBASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC1.55□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms