Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC019226.2-201ENST00000625973 424 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC053481.2-202ENST00000582394 1500 ntBASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 XIAPP3-201ENST00000312918 795 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNA5SP130-201ENST00000364431 114 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU6-730P-201ENST00000383954 104 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU6-1122P-201ENST00000384449 107 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AF228730.1-201ENST00000397972 663 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS4XP9-201ENST00000405151 780 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU4-6P-201ENST00000410804 122 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC009480.2-201ENST00000422916 432 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NIPA2P1-201ENST00000426223 976 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PSMA2P3-201ENST00000429685 675 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CETN4P-201ENST00000432407 469 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS25P9-201ENST00000435591 252 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 Z74696.2-201ENST00000436514 498 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 YWHAZP7-201ENST00000436906 631 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC092427.1-201ENST00000439177 601 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTND1P26-201ENST00000440488 538 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL39P6-201ENST00000448289 150 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RSL24D1P3-201ENST00000449255 495 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL26P28-201ENST00000451325 435 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC146507.1-201ENST00000468335 354 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS29P22-201ENST00000472363 168 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS23P1-201ENST00000491662 432 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RAC1P2-201ENST00000511164 579 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FTH1P9-201ENST00000513251 355 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU6-583P-201ENST00000516012 92 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR5AK1P-201ENST00000524837 922 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP003461.1-201ENST00000528866 78 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CBX3P5-201ENST00000552017 521 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL121576.1-201ENST00000556055 276 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 VN1R79P-201ENST00000593540 513 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC008745.1-201ENST00000604064 271 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC112220.3-201ENST00000605502 502 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC245297.2-201ENST00000610119 565 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 uc_338.32-201ENST00000615087 172 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL445567.2-201ENST00000618935 498 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC079684.1-201ENST00000621405 437 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP003485.2-201ENST00000623636 610 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC007490.1-201ENST00000624321 703 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU6-931P-201ENST00000363850 107 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC016769.3-201ENST00000396562 315 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL23AP29-201ENST00000397284 453 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 EIF5P1-201ENST00000400019 1231 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL691449.1-201ENST00000426570 421 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SNORA71B-202ENST00000439232 272 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SNRPGP5-201ENST00000456003 220 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL21P11-201ENST00000461458 483 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RN7SL738P-201ENST00000470264 297 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC022034.3-201ENST00000471393 478 ntBASIC3.5□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PPIAP15-201ENST00000479662 484 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms