Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 SNORA70G-201ENST00000383923 142 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 Y_RNA.569-201ENST00000384749 103 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 MIR187-201ENST00000385062 109 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 MIR27A-201ENST00000385073 78 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 Y_RNA.623-201ENST00000411128 95 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 CEACAMP1-201ENST00000434624 1035 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC010655.1-201ENST00000449336 292 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 RNU7-87P-201ENST00000459343 62 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 RNU6-1037P-201ENST00000459571 107 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 RN7SL390P-201ENST00000470634 284 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 MTND3P25-201ENST00000509243 135 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 RNU6-971P-201ENST00000516920 106 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 OR1F2P-201ENST00000570470 933 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC067852.3-201ENST00000589177 561 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AL078624.2-201ENST00000605063 554 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC011476.5-201ENST00000615594 130 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC008785.1-201ENST00000624475 456 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 CYP4F35P-202ENST00000636121 390 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 AC020658.2-201ENST00000559030 4020 ntBASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
PCDHB13Q9Y5F0 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB13Q9Y5F0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RPL9P7-201ENST00000330965 580 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RNA5SP65-201ENST00000363166 119 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MIR640-201ENST00000385086 96 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 HSPE1P8-201ENST00000406997 288 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 CYCSP17-201ENST00000407870 315 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 BX323845.3-201ENST00000428215 527 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AL513043.1-201ENST00000439124 535 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RPL7AP71-201ENST00000451120 739 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RN7SKP210-201ENST00000459176 261 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 RN7SL216P-201ENST00000471607 298 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MIR378C-201ENST00000578683 81 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MIR378H-201ENST00000579966 83 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 LRRC37A5P-203ENST00000580181 585 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AL008718.3-201ENST00000610217 321 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 MRPL57P3-201ENST00000619218 176 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC120057.5-201ENST00000623840 154 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 AC114947.2-201ENST00000565748 2125 ntBASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB13Q9Y5F0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB13Q9Y5F0 AC092821.2-201ENST00000545710 2042 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms