Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SNORD73A-201ENST00000386062 65 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 MRPL32P1-201ENST00000406301 247 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 OR6D1P-201ENST00000436165 939 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 HMGN2P13-201ENST00000476476 274 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-1333P-201ENST00000516162 93 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 MIR4282-201ENST00000583613 67 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC011921.2-201ENST00000589465 152 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 MIR3976-201ENST00000606807 139 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 MIR7854-201ENST00000620068 65 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC006453.3-201ENST00000635891 377 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AC099654.15-201ENST00000639802 509 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 AL139384.2-201ENST00000613809 3590 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 RACGAP1P-201ENST00000550663 1879 ntBASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VPS9D1Q9Y2B5 PABPC1P8-201ENST00000452851 2086 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AL137003.2-201ENST00000606924 2538 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-325P-201ENST00000411132 105 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 RNU5E-9P-201ENST00000411164 104 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 PRUNEP1-201ENST00000425846 705 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC073063.1-201ENST00000434352 607 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 NUTF2P7-201ENST00000453086 375 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AL445433.1-201ENST00000457507 257 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 Y_RNA.638-201ENST00000459374 113 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC022034.3-201ENST00000471393 478 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 OR9A1P-202ENST00000484361 945 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC093840.1-201ENST00000511599 336 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 RNU6-426P-201ENST00000516464 97 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 IGKV2D-38-201ENST00000518423 240 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 RN7SL131P-201ENST00000579043 256 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 GLYATL1P2-202ENST00000588046 902 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC068790.4-201ENST00000602474 263 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 MIR6883-201ENST00000614952 78 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC027506.1-201ENST00000621395 198 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 SNX18P10-201ENST00000625014 519 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 AC009229.4-201ENST00000623854 1947 ntBASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VPS9D1Q9Y2B5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
VPS9D1Q9Y2B5 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 RNU6-595P-201ENST00000363944 107 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 RNU1-46P-201ENST00000384425 164 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AL079342.1-201ENST00000401460 267 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 MTCO1P39-201ENST00000426148 480 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC110602.1-201ENST00000437414 318 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 PFN1P11-201ENST00000445829 389 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC008264.1-201ENST00000447612 367 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms