Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC048346.1-201ENST00000510247 144 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 MTCO3P15-201ENST00000526563 574 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AP005262.1-201ENST00000582646 997 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AL606834.2-201ENST00000602954 668 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC093732.2-201ENST00000607950 274 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-156P-201ENST00000621869 107 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC011978.2-201ENST00000569835 2054 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-619P-201ENST00000365146 108 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 MIR122-201ENST00000385044 85 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AL139095.1-201ENST00000404326 391 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 RNU2-21P-201ENST00000410368 188 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 RPS7P9-201ENST00000414704 586 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC233981.1-201ENST00000423224 461 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 MRPL42P4-201ENST00000453267 443 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 SNORA19.3-201ENST00000516165 130 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 SCARNA1-201ENST00000517138 166 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 MTND2P26-201ENST00000528255 1029 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 MIR4504-201ENST00000577413 92 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 BNIP3P39-201ENST00000601077 554 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 MRPS35P3-201ENST00000603189 709 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC096947.1-201ENST00000603233 470 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC112220.2-201ENST00000605513 533 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AP000238.1-201ENST00000608759 426 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AL121652.1-201ENST00000608851 448 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC099654.9-201ENST00000637055 678 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 AC009452.1-201ENST00000640823 606 ntBASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.75□□□□□ -1.33
SHROOM4Q9ULL8 RNU5E-10P-201ENST00000363506 118 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 MTCO1P56-201ENST00000401674 224 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 RPS15AP40-201ENST00000419621 391 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 HIGD1AP12-201ENST00000427832 281 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC091862.1-201ENST00000438016 1100 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 GAPDHP39-201ENST00000481866 979 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 RNA5SP154-201ENST00000516193 111 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 SUMO2P20-201ENST00000520803 283 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 DEFB130C-202ENST00000530001 230 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC122134.1-202ENST00000569111 1201 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC113194.1-201ENST00000606037 500 ntBASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SHROOM4Q9ULL8 SNORD74.4-201ENST00000364129 80 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 Y_RNA.578-201ENST00000390903 88 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 HLFP1-201ENST00000402375 499 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 ELOCP6-201ENST00000429066 328 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 Z99714.1-201ENST00000450463 807 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 ELOCP12-201ENST00000458706 328 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-202P-201ENST00000515998 96 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AP003973.1-201ENST00000604639 691 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC087821.2-201ENST00000637086 450 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC233263.6-201ENST00000631132 1963 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 RNU1-140P-201ENST00000365040 165 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-575P-201ENST00000411326 105 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 SDCBPP2-201ENST00000424643 885 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 RPS15AP1-201ENST00000457423 391 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 RPL21P71-201ENST00000465598 459 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC006445.1-201ENST00000491925 405 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms