Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 MTND5P19-201ENST00000424872 1794 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AL353743.1-202ENST00000431724 1695 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 MIR22-201ENST00000362190 85 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 SNORA63.1-201ENST00000362493 131 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 RNU6-1293P-201ENST00000384077 107 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 MIR670-201ENST00000390142 98 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AL138880.1-201ENST00000405824 642 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 DPPA2P1-201ENST00000428060 556 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 RPL7P23-201ENST00000493874 747 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 HIGD1AP3-201ENST00000515857 278 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC022616.2-201ENST00000523185 300 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AF279873.1-201ENST00000523393 313 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC023158.1-201ENST00000561632 1025 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC005951.1-201ENST00000576706 485 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC135803.1-201ENST00000608748 565 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC084757.4-201ENST00000616350 526 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 AC007318.2-201ENST00000620999 243 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 RNU6-156P-201ENST00000621869 107 ntBASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS29Q9UBQ0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 RNVU1-14-201ENST00000384770 164 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 RNU2-71P-201ENST00000411395 189 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 RPS3AP25-201ENST00000411660 793 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AJ239321.1-201ENST00000424255 564 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 RPL7P59-201ENST00000447700 943 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC091179.1-201ENST00000461606 579 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC074250.1-201ENST00000511117 192 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AL049870.4-201ENST00000555741 486 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 MIR5004-201ENST00000579078 107 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 MIR4429-201ENST00000580105 73 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC005412.1-201ENST00000580812 1049 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC009303.3-201ENST00000591103 736 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AC138473.1-201ENST00000605717 526 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AL162574.2-201ENST00000614618 657 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 OR8B1P-202ENST00000641132 1178 ntBASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS29Q9UBQ0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RNU1-85P-201ENST00000364127 164 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 DYNLT3P1-201ENST00000378574 347 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RN7SKP220-201ENST00000410611 288 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RN7SKP58-201ENST00000411010 305 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 TOMM22P1-201ENST00000418578 312 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC023128.2-201ENST00000420880 1223 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AL160175.1-201ENST00000428124 247 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 TRIM60P18-201ENST00000441518 828 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC089999.1-201ENST00000460336 374 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RPL5P24-201ENST00000463742 885 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RPS17P11-201ENST00000474297 293 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC006483.1-201ENST00000487308 313 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RPL21P129-201ENST00000491732 478 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 PRELID3BP6-201ENST00000503839 571 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC108043.1-201ENST00000512696 574 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 RN7SKP272-201ENST00000516988 232 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms