Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC005771.1-201ENST00000585581 349 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC083760.1-201ENST00000589621 670 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL133338.2-201ENST00000604292 736 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL513477.2-201ENST00000607858 568 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL355816.1-201ENST00000607951 118 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC015813.4-201ENST00000610469 179 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC138932.5-201ENST00000617759 563 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC025125.1-201ENST00000624743 1922 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL118496.1-201ENST00000440201 1812 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ZNF37BP-203ENST00000452306 1352 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL592148.3-201ENST00000608771 2646 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 OR56B2P-202ENST00000641377 2453 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC011266.1-201ENST00000624119 3569 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC126755.2-208ENST00000327792 462 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC138969.1-213ENST00000331436 462 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 RNU6-348P-201ENST00000384386 107 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 MIR23B-201ENST00000384832 97 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 MIR129-1-201ENST00000384972 72 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 RNA5SP332-201ENST00000391063 115 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 GLULP6-201ENST00000399502 913 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 RN7SKP177-201ENST00000410567 355 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL953862.1-201ENST00000423016 168 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ACTR3P2-201ENST00000439585 1257 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC005008.1-201ENST00000456151 612 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AK3P4-201ENST00000504283 583 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC111000.3-201ENST00000508057 576 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC093824.1-201ENST00000508796 343 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 RNU6-583P-201ENST00000516012 92 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 ARL2BPP5-201ENST00000523141 481 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 DEFB131D-201ENST00000526803 184 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 CCNG2P1-201ENST00000549521 1000 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL355073.2-201ENST00000612106 557 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AL589743.7-201ENST00000612637 233 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC243654.2-201ENST00000612843 443 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 uc_338.32-201ENST00000615087 172 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC068831.8-201ENST00000620171 435 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC095031.1-201ENST00000623685 672 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC099654.12-201ENST00000639868 649 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 TEX21P-201ENST00000447107 1476 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 AC068254.2-201ENST00000623938 3577 ntBASIC4.66□□□□□ -1.66
DKK3Q9UBP4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.66□□□□□ -1.66
DKK3Q9UBP4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
DKK3Q9UBP4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 RNU6-723P-201ENST00000383973 107 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 RPL17P12-201ENST00000413391 526 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 MTND1P23-201ENST00000416931 372 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC234782.4-201ENST00000417646 1048 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC092647.1-201ENST00000420654 287 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AL389915.1-201ENST00000422463 466 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DKK3Q9UBP4 AC073335.1-201ENST00000427776 363 ntBASIC4.65□□□□□ -1.67
DKK3Q9UBP4 RPL23AP1-201ENST00000428990 471 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms