Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 THAP12P5-201ENST00000405864 2275 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 MTCO1P17-201ENST00000411522 491 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RPL7P57-201ENST00000423238 740 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RPS3AP54-201ENST00000435535 734 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RPL12P46-201ENST00000436610 195 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 DNAJC19P4-201ENST00000440115 345 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AP000542.1-201ENST00000448473 371 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 Z82190.1-201ENST00000454534 490 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RPL23AP24-201ENST00000458203 385 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 PLGLA-201ENST00000465668 449 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 PABPC1P3-201ENST00000469174 459 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 TMED11P-201ENST00000479478 690 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL358832.1-201ENST00000497800 389 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC093767.1-201ENST00000504523 156 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC109927.2-201ENST00000506416 303 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AP000827.1-201ENST00000527814 258 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 LSM3P2-201ENST00000551246 273 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC087477.6-201ENST00000559595 843 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RBM11P1-201ENST00000604951 799 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC113194.1-201ENST00000606037 500 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC010857.1-201ENST00000606398 594 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC126118.1-201ENST00000607744 628 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AL139089.1-201ENST00000620372 975 ntBASIC4.78□□□□□ -1.64
TDP1Q9NUW8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TDP1Q9NUW8 AC114546.3-201ENST00000623582 1734 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC010300.1-201ENST00000600671 5134 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AP002001.2-201ENST00000529025 1469 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 SAGE4P-201ENST00000442271 3381 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 Y_RNA.608-201ENST00000410647 95 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 RPS15AP40-201ENST00000419621 391 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 SKP1P1-201ENST00000438081 489 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 PGBD4P3-201ENST00000440731 581 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 HSPE1P28-201ENST00000443139 211 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC093392.2-201ENST00000450682 337 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 RPS20P21-201ENST00000466859 343 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 RPL21P126-201ENST00000470049 478 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 RNF138P1-201ENST00000502765 546 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 NDUFB4P2-201ENST00000509515 391 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC092470.1-201ENST00000546187 132 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.77□□□□□ -1.65
TDP1Q9NUW8 CYCSP40-201ENST00000575927 294 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 MIR3913-1-201ENST00000577744 102 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC009977.1-201ENST00000586015 570 ntBASIC4.77□□□□□ -1.65
TDP1Q9NUW8 AC090948.1-201ENST00000607464 549 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms