Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC027290.2-201ENST00000623210 18662 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-636P-201ENST00000384598 107 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RNU6-906P-201ENST00000384700 70 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 MIR3074-201ENST00000384885 81 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 U3.29-201ENST00000391296 212 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 USP9YP11-201ENST00000427537 717 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RPL23AP76-201ENST00000441860 458 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 USP9YP34-201ENST00000453983 808 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC026410.2-201ENST00000460281 156 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RPS15AP17-201ENST00000470598 390 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC092451.1-201ENST00000480211 153 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 ACTG1P13-201ENST00000486987 1043 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 HMGB1P28-201ENST00000507778 552 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC109445.1-201ENST00000512356 383 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RN7SKP21-201ENST00000516503 220 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AL121603.1-201ENST00000553815 142 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC120057.2-201ENST00000571520 271 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 OR4K7P-201ENST00000580232 945 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC009220.3-201ENST00000604318 586 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC010738.1-201ENST00000604970 987 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC055876.5-201ENST00000605667 259 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AL590282.1-201ENST00000610379 1136 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 uc_338.32-201ENST00000615087 172 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC092650.2-201ENST00000619984 902 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC068831.8-201ENST00000620171 435 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC079684.1-201ENST00000621405 437 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AC040168.1-201ENST00000623594 991 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 AL133383.2-201ENST00000622958 2336 ntBASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BLOC1S4Q9NUP1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC010300.1-201ENST00000600671 5134 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RNA5SP515-201ENST00000364570 118 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 Y_RNA.465-201ENST00000384293 102 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 TAF9BP1-201ENST00000396646 746 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RNA5SP80-201ENST00000410475 111 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RAD23BP2-201ENST00000416003 1207 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AL356535.1-201ENST00000440335 398 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RPS24P6-201ENST00000452670 400 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RPS3AP6-201ENST00000484430 795 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 SCARNA14-201ENST00000516903 136 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 HSPA8P13-201ENST00000523715 472 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 MED28P5-201ENST00000528254 438 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RN7SL703P-201ENST00000578485 302 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC245036.5-201ENST00000596330 847 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC015726.1-201ENST00000602353 681 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC011816.2-201ENST00000607089 556 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC243773.3-201ENST00000613270 256 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC048347.1-201ENST00000624621 427 ntBASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BLOC1S4Q9NUP1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.31□□□□□ -1.72
BLOC1S4Q9NUP1 MTND4P26-201ENST00000415971 1359 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms