Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC114495.1-201ENST00000441274 436 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RPL7P15-201ENST00000461190 712 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 SNRPCP2-201ENST00000504370 475 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC108078.1-201ENST00000508073 725 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RNU2-46P-201ENST00000517038 113 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RNA5SP373-201ENST00000517271 95 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 MIR4330-201ENST00000579077 105 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 MIR4697-201ENST00000582977 78 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC245014.2-201ENST00000603689 287 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AL451044.1-201ENST00000604867 238 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AP000860.1-201ENST00000605250 559 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC246785.4-201ENST00000605374 287 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC091953.3-201ENST00000623220 236 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 MAPK10-349ENST00000641767 3661 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RNA5SP335-201ENST00000363817 110 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RPL17P50-201ENST00000396131 546 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AL592291.1-201ENST00000403830 352 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC127526.1-201ENST00000417526 366 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC108075.1-201ENST00000424692 529 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 ELOCP18-201ENST00000434209 337 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 UBE2V1P8-201ENST00000437166 265 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC112653.1-201ENST00000443851 386 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AL389915.2-201ENST00000454576 441 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RNU6-314P-201ENST00000516574 104 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RN7SKP116-201ENST00000516902 319 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC079075.1-201ENST00000559543 878 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 MIR3934-201ENST00000579806 107 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AL365503.1-201ENST00000605247 905 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 FAM25E-202ENST00000608562 189 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 BX664608.1-201ENST00000610519 487 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AL158209.2-201ENST00000619266 216 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 SCARNA15-201ENST00000607520 4325 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCM2LQ9NUG4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 AC011460.1-201ENST00000636268 1834 ntBASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 MTND5P33-201ENST00000571250 1450 ntBASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCM2LQ9NUG4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms