Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 MIR544B-201ENST00000582372 78 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 MIR4307-201ENST00000582802 84 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL020997.2-201ENST00000602607 184 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC010857.1-201ENST00000606398 594 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC004492.1-201ENST00000607036 742 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC090948.2-201ENST00000607363 564 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC027807.2-201ENST00000616099 408 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC009318.4-201ENST00000620496 486 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AP000843.1-201ENST00000624880 701 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC006065.6-201ENST00000625201 545 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 OR5BE1P-202ENST00000641168 1176 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTA1Q9NP79 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTA1Q9NP79 DHX9P1-201ENST00000436565 3076 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTA1Q9NP79 EIF2AP4-201ENST00000424793 1781 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTA1Q9NP79 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 OR5P1P-201ENST00000299512 925 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 OR11H4-201ENST00000315409 1082 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 Y_RNA.6-201ENST00000362350 114 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 Y_RNA.359-201ENST00000365498 102 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 SNORA70C-201ENST00000384538 135 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 DHFRP6-201ENST00000401776 268 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RPS15AP40-201ENST00000419621 391 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 CKS1BP6-201ENST00000424932 240 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 LSM1P1-201ENST00000438629 273 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 PHBP16-201ENST00000446318 950 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RPL7P31-201ENST00000450192 724 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC053481.1-201ENST00000467217 306 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC090686.1-201ENST00000481577 749 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC093767.1-201ENST00000504523 156 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC108064.1-201ENST00000513791 460 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RN7SKP298-201ENST00000515950 94 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RNA5SP249-201ENST00000516127 99 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 LARP7P2-201ENST00000575306 125 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL353997.4-201ENST00000586196 166 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC091805.2-201ENST00000603848 235 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC023043.4-201ENST00000612081 449 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC005332.10-201ENST00000612725 619 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL445567.2-201ENST00000618935 498 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AL022578.1-201ENST00000439330 1433 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTA1Q9NP79 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 CPHL1P-201ENST00000461341 3407 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 ASNSP1-201ENST00000518311 1939 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VTA1Q9NP79 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTA1Q9NP79 AC000123.3-201ENST00000624029 4975 ntBASIC5.11□□□□□ -1.59
VTA1Q9NP79 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 Y_RNA.126-201ENST00000363382 111 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 MTCYBP36-201ENST00000404146 440 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 MTCO1P17-201ENST00000411522 491 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 HMGN1P14-201ENST00000412459 517 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 RPL17P36-201ENST00000420302 549 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 OFD1P18Y-201ENST00000420889 959 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 RAD23BP1-201ENST00000421404 1227 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 RPS27AP12-201ENST00000429552 465 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 USP9YP14-201ENST00000430663 563 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms