Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 XPOTP1-201ENST00000443317 2398 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC100778.3-201ENST00000580060 1750 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC011460.1-201ENST00000636268 1834 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 RNU1-150P-201ENST00000362491 162 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 RNU6-552P-201ENST00000362869 119 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 RNU6-1293P-201ENST00000384077 107 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 MIR558-201ENST00000384920 94 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 MIR551B-201ENST00000384984 96 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 FTH1P1-201ENST00000437933 532 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 SUMO2P3-201ENST00000438311 288 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 CEACAMP9-201ENST00000442990 513 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AL118520.1-201ENST00000450770 291 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 HMGB3P22-202ENST00000451823 572 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC009963.3-201ENST00000458090 486 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AP001992.1-205ENST00000462248 379 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC023194.2-201ENST00000465398 406 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 ST13P14-201ENST00000474095 734 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 RN7SL814P-201ENST00000487715 300 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 Y_RNA.682-201ENST00000516457 100 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 Y_RNA.720-201ENST00000517166 92 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 COX6CP5-201ENST00000527162 228 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC128657.1-201ENST00000549459 145 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC063950.1-201ENST00000552036 308 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 SNRPGP18-201ENST00000553000 214 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC053481.3-201ENST00000577881 843 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 RN7SL356P-201ENST00000582228 248 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 RPL23AP92-201ENST00000603609 255 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC124916.2-201ENST00000604416 224 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AP000654.2-201ENST00000605633 586 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSU72Q9NP77 AL596245.1-201ENST00000618994 362 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 RNU6-156P-201ENST00000621869 107 ntBASIC5.4□□□□□ -1.54
SSU72Q9NP77 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.4□□□□□ -1.54
SSU72Q9NP77 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSU72Q9NP77 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSU72Q9NP77 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSU72Q9NP77 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SSU72Q9NP77 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSU72Q9NP77 AC000374.1-201ENST00000434698 1745 ntBASIC5.4□□□□□ -1.55
SSU72Q9NP77 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SSU72Q9NP77 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.4□□□□□ -1.55
SSU72Q9NP77 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL034549.2-201ENST00000618285 3373 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL360270.2-201ENST00000562952 5985 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC009902.3-201ENST00000606235 2172 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 Y_RNA.414-201ENST00000384011 101 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RNU6-196P-201ENST00000384315 107 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 MIR551A-201ENST00000385042 96 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 MT-TR-201ENST00000387439 65 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 U3.20-201ENST00000390909 217 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RNA5SP231-201ENST00000410496 138 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.39□□□□□ -1.55
SSU72Q9NP77 ATP5LP2-201ENST00000440646 311 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RPL21P89-201ENST00000444021 467 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RPS26P56-201ENST00000444468 240 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 AC104308.1-201ENST00000454621 333 ntBASIC5.39□□□□□ -1.55
SSU72Q9NP77 RNU7-180P-201ENST00000459240 63 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms