Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC055876.1-202ENST00000567053 138 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 RPL12P50-201ENST00000603116 116 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 OR2AS2P-201ENST00000606902 342 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 AL391834.1-201ENST00000609609 560 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 MIR7851-201ENST00000610611 160 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 AC073348.1-201ENST00000623002 331 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 AL137790.1-201ENST00000634283 177 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 LRRC77P-213ENST00000637727 880 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM4Q9C037 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM4Q9C037 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM4Q9C037 AC107081.3-201ENST00000612715 2034 ntBASIC3.27□□□□□ -1.89
TRIM4Q9C037 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM4Q9C037 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM4Q9C037 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM4Q9C037 RPL31P2-201ENST00000413849 377 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AL390023.1-201ENST00000428836 262 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AL662791.1-201ENST00000441992 928 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC023598.1-201ENST00000472521 361 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 OR5H4P-201ENST00000510851 923 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 RNU6-319P-201ENST00000516025 108 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC104986.1-201ENST00000517978 436 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AL033523.1-201ENST00000605153 153 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC116563.2-201ENST00000624751 535 ntBASIC3.26□□□□□ -1.89
TRIM4Q9C037 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM4Q9C037 AC103988.1-201ENST00000566382 2177 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 NMD3P1-201ENST00000439704 1488 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 RNU6-532P-201ENST00000384318 107 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 RNA5SP80-201ENST00000410475 111 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC013404.1-201ENST00000413068 249 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 RPL7P10-201ENST00000417407 739 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC006028.1-201ENST00000438379 402 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 RBMY2UP-201ENST00000453474 324 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC097462.2-201ENST00000504623 481 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC107934.2-201ENST00000518653 310 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AP003117.1-201ENST00000602771 554 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC131902.3-201ENST00000611767 581 ntBASIC3.25□□□□□ -1.89
TRIM4Q9C037 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM4Q9C037 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM4Q9C037 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM4Q9C037 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM4Q9C037 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM4Q9C037 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM4Q9C037 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 ELOCP6-201ENST00000429066 328 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 AL590639.1-201ENST00000456484 337 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 ELOCP12-201ENST00000458706 328 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 RPL27AP5-201ENST00000469428 449 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 RNU1-143P-201ENST00000516296 146 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 OR4U1P-201ENST00000554958 912 ntBASIC3.24□□□□□ -1.89
TRIM4Q9C037 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM4Q9C037 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms