Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC087369.1-201ENST00000520775 996 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 DYNLL1P4-201ENST00000549314 266 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AC091805.2-201ENST00000603848 235 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 BNIP3P4-201ENST00000604946 565 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AL591034.3-201ENST00000605511 685 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AL391497.1-201ENST00000608671 547 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 U4.5-201ENST00000617137 123 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AC116618.1-201ENST00000634617 774 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 AC099654.12-201ENST00000639868 649 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SALL3Q9BXA9 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.94□□□□□ -1.62
SALL3Q9BXA9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RNA5SP317-201ENST00000410176 116 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RNU2-66P-201ENST00000410650 161 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RN7SKP222-201ENST00000410651 315 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RNA5SP311-201ENST00000411290 116 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AL161747.1-201ENST00000480068 358 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 VPS26AP1-201ENST00000483197 979 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RPL29P14-201ENST00000495837 428 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 ARL2BPP4-201ENST00000506854 471 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC090071.1-201ENST00000507713 644 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC108471.1-201ENST00000513977 287 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 FABP5P5-201ENST00000515537 406 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RNA5SP315-201ENST00000516340 116 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RNA5SP312-201ENST00000517068 116 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 HMGB1P23-201ENST00000518743 568 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC087808.1-201ENST00000520501 361 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC025260.1-201ENST00000548858 430 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 SERPINE4P-201ENST00000554978 281 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 MTND1P15-201ENST00000579262 949 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 OR4G1P-201ENST00000588632 938 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC083899.3-201ENST00000603413 594 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AL590392.1-201ENST00000604960 446 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC112220.3-201ENST00000605502 502 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC068276.1-201ENST00000605793 379 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC131235.4-201ENST00000609288 620 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 AC013476.2-201ENST00000614456 459 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 MIR6830-201ENST00000636015 70 ntBASIC4.93□□□□□ -1.62
SALL3Q9BXA9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SALL3Q9BXA9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 IQCB2P-201ENST00000401788 1633 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 MAPK10-320ENST00000641462 6696 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 SNORA60-201ENST00000362396 134 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 Y_RNA.311-201ENST00000365068 96 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 RNA5SP104-201ENST00000410989 118 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 MTCO2P19-201ENST00000427513 598 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AL139415.2-201ENST00000431968 163 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SALL3Q9BXA9 FABP3P2-201ENST00000453169 399 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 SSXP1-201ENST00000453640 473 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 SNRPGP9-201ENST00000456025 225 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 RPL38P1-201ENST00000460914 211 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 RPL5P30-201ENST00000465511 891 ntBASIC4.92□□□□□ -1.62
SALL3Q9BXA9 AC072039.1-201ENST00000477611 581 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms