Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL121766.1-201ENST00000547436 487 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MTND3P13-201ENST00000574391 343 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 GAS5-AS1-201ENST00000602767 694 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AC112230.1-201ENST00000604342 547 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL163642.2-201ENST00000604722 1019 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL109618.2-201ENST00000605527 211 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL512506.2-201ENST00000624472 458 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 LINC00561-201ENST00000565815 2738 ntBASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.68□□□□□ -1.82
CCM2Q9BSQ5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 SNORA70E-201ENST00000384492 135 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RNU6-1300P-201ENST00000391046 108 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 FCF1P2-201ENST00000415284 583 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 Z75741.2-201ENST00000417272 1167 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 BOLA3P4-201ENST00000418151 400 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RPL31P45-201ENST00000419532 356 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 NANOGP5-201ENST00000424456 877 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 B3GNT2P1-201ENST00000434960 952 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC093155.1-201ENST00000440164 826 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 OR10R1P-201ENST00000441524 1141 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 NOTCH2P1-201ENST00000443481 624 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RN7SL330P-201ENST00000469709 307 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC022034.3-201ENST00000471393 478 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 HMGN1P11-201ENST00000508668 303 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 PAICSP4-201ENST00000517543 1253 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC006270.2-201ENST00000578523 652 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC006130.2-201ENST00000586202 326 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RNU1-30P-201ENST00000606575 163 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RNU4-5P-201ENST00000607255 135 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL391497.1-201ENST00000608671 547 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AC105429.2-201ENST00000610567 517 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 AL158163.2-201ENST00000619110 700 ntBASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCM2Q9BSQ5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 RNU6-492P-201ENST00000363035 104 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 SOD2P1-201ENST00000396543 562 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 SSXP10-201ENST00000402595 565 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC007390.1-201ENST00000415722 356 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AC092648.1-201ENST00000425870 423 ntBASIC3.66□□□□□ -1.82
CCM2Q9BSQ5 AL365396.1-201ENST00000430854 671 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms