Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPN18Q99952 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPN18Q99952 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
PTPN18Q99952 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 A2MP1-204ENST00000566278 4130 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 MIR331-201ENST00000362302 94 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 RNA5SP453-201ENST00000362503 119 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 Y_RNA.263-201ENST00000364659 114 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 Y_RNA.402-201ENST00000383972 102 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 SNORD116-23-201ENST00000384645 92 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 Y_RNA.573-201ENST00000384763 105 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 MIR1284-201ENST00000408337 120 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC068533.2-201ENST00000411872 306 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AL136133.1-201ENST00000413694 376 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC009302.1-201ENST00000417147 390 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AL356095.1-201ENST00000417217 199 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 BOLA3P4-201ENST00000418151 400 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC092647.1-201ENST00000420654 287 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.23□□□□□ -1.57
PTPN18Q99952 OFD1P18Y-201ENST00000420889 959 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC007742.1-201ENST00000425789 329 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 COX6CP15-201ENST00000426313 211 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PTPN18Q99952 NPM1P18-201ENST00000434232 732 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 ELOCP26-201ENST00000436067 329 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN18Q99952 ISCUP1-201ENST00000454451 448 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 ARPC3P2-201ENST00000457786 533 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 HMGN1P10-201ENST00000474557 553 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 RBM43P1-201ENST00000476891 1081 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC108078.1-201ENST00000508073 725 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 RNU6-488P-201ENST00000515918 99 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 PAICSP4-201ENST00000517543 1253 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 MTCO2P4-201ENST00000517968 247 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 CENPUP1-201ENST00000526649 1202 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 AC005868.1-201ENST00000536421 331 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC090515.3-201ENST00000560431 315 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC138915.2-201ENST00000569776 97 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC098614.4-201ENST00000607601 462 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 MIR8059-201ENST00000620427 81 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 MIR6075-201ENST00000620782 95 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AL359880.1-201ENST00000621879 266 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 AC112484.5-201ENST00000624189 228 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTPN18Q99952 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN18Q99952 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN18Q99952 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.23□□□□□ -1.57
PTPN18Q99952 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPN18Q99952 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 AC107982.1-201ENST00000507171 1300 ntBASIC5.23□□□□□ -1.57
PTPN18Q99952 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.23□□□□□ -1.57
PTPN18Q99952 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN18Q99952 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN18Q99952 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN18Q99952 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN18Q99952 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
PTPN18Q99952 AL022311.1-201ENST00000623726 19416 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTPN18Q99952 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTPN18Q99952 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTPN18Q99952 SNORA71.3-201ENST00000362582 128 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 RNU6-433P-201ENST00000363216 104 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 RNU5F-7P-201ENST00000363696 115 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 RNA5SP387-201ENST00000364226 106 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 SNORA62.3-201ENST00000365110 153 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.22□□□□□ -1.57
PTPN18Q99952 MIR554-201ENST00000384874 96 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 SNORA40.3-201ENST00000390964 122 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PTPN18Q99952 COX5BP7-201ENST00000414780 274 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 AC013429.2-201ENST00000418798 781 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.22□□□□□ -1.57
PTPN18Q99952 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.22□□□□□ -1.57
PTPN18Q99952 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.22□□□□□ -1.57
PTPN18Q99952 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms