Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 RPS12P2-201ENST00000439728 269 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 AL353705.4-201ENST00000449661 238 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC005921.1-201ENST00000510589 286 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 RN7SKP60-201ENST00000516985 239 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 IGKV2-36-201ENST00000519999 223 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 HPRT1P3-201ENST00000539521 576 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC008507.1-201ENST00000587506 734 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 ZNF861P-201ENST00000588126 639 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC008277.2-201ENST00000605196 797 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC010338.1-201ENST00000621823 717 ntBASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
IFT140Q96RY7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
IFT140Q96RY7 AC091564.4-201ENST00000533934 2194 ntBASIC4.38□□□□□ -1.71
IFT140Q96RY7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT140Q96RY7 MIR27B-201ENST00000385129 97 ntBASIC4.38□□□□□ -1.71
IFT140Q96RY7 AL137014.1-201ENST00000420490 1226 ntBASIC4.38□□□□□ -1.71
IFT140Q96RY7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
IFT140Q96RY7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 MIR7111-201ENST00000619751 72 ntBASIC4.38□□□□□ -1.71
IFT140Q96RY7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT140Q96RY7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT140Q96RY7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.38□□□□□ -1.71
IFT140Q96RY7 SYT14P1-202ENST00000600441 1448 ntBASIC4.38□□□□□ -1.71
IFT140Q96RY7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
IFT140Q96RY7 SKINT1L-201ENST00000401057 817 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 HIGD1AP2-201ENST00000446367 280 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC015911.5-201ENST00000587076 451 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC026634.1-201ENST00000634369 198 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC117529.2-201ENST00000512159 2068 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 ELL2P4-201ENST00000446870 1376 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
IFT140Q96RY7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
IFT140Q96RY7 U3.11-201ENST00000364476 212 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 SNORA46-201ENST00000384762 135 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 Z98941.1-201ENST00000407764 100 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 MTND6P18-201ENST00000439477 513 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 UQCRHP3-201ENST00000451503 251 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT140Q96RY7 AL358913.1-201ENST00000554342 121 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC007424.1-203ENST00000554613 687 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 AC009101.1-201ENST00000568135 242 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 Z82195.1-201ENST00000604558 398 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 U4.3-201ENST00000621047 82 ntBASIC4.37□□□□□ -1.71
IFT140Q96RY7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 PWAR6-201ENST00000552334 4618 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
IFT140Q96RY7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
IFT140Q96RY7 Y_RNA.4-201ENST00000362333 112 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 RPL31P1-201ENST00000398116 372 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 HSPD1P16-201ENST00000402302 394 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 AC127526.1-201ENST00000417526 366 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 AC093663.2-201ENST00000484625 313 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 RN7SKP24-201ENST00000515888 284 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 AC087468.1-201ENST00000604365 630 ntBASIC4.36□□□□□ -1.71
IFT140Q96RY7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.36□□□□□ -1.71
IFT140Q96RY7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT140Q96RY7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT140Q96RY7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT140Q96RY7 AMD1P2-201ENST00000412936 992 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 DPH3P2-201ENST00000422618 250 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 AP000936.3-201ENST00000438127 255 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 AC108471.1-201ENST00000513977 287 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 AC009163.5-201ENST00000575421 637 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 AL365503.1-201ENST00000605247 905 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
IFT140Q96RY7 AC093908.1-201ENST00000623125 8092 ntBASIC4.35□□□□□ -1.71
IFT140Q96RY7 SNORD56.3-201ENST00000363507 71 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
IFT140Q96RY7 AC073136.2-201ENST00000417282 849 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 RPS26P40-201ENST00000435209 294 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 PPIAP17-201ENST00000438507 471 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 HMGN2P23-201ENST00000456759 269 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 CKS1BP2-201ENST00000497342 240 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 AC234781.5-201ENST00000508429 271 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms