Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC109780.2-201ENST00000413467 845 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.9□□□□□ -1.63
HPS3Q969F9 RPL7P31-201ENST00000450192 724 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.9□□□□□ -1.63
HPS3Q969F9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC021146.3-201ENST00000511911 260 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 OR5BC1P-201ENST00000529327 739 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC068831.4-201ENST00000556118 109 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC006362.1-201ENST00000567392 174 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.9□□□□□ -1.63
HPS3Q969F9 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 OR4G1P-201ENST00000588632 938 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC083760.1-201ENST00000589621 670 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC090186.1-201ENST00000605991 572 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC103710.4-201ENST00000609301 899 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AL158196.1-201ENST00000616786 434 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AC007546.2-201ENST00000623996 360 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 AP000843.1-201ENST00000624880 701 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HPS3Q969F9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HPS3Q969F9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 AC027290.2-201ENST00000623210 18662 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 MTND4P4-201ENST00000439033 1366 ntBASIC4.9□□□□□ -1.63
HPS3Q969F9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.9□□□□□ -1.63
HPS3Q969F9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 RNU6-289P-201ENST00000364093 107 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AL133412.1-201ENST00000380194 2992 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 SDHCP2-201ENST00000398565 501 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC097374.1-203ENST00000400783 485 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AL356967.1-201ENST00000406305 431 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MIR1305-201ENST00000408300 86 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.89□□□□□ -1.63
HPS3Q969F9 RN7SKP266-201ENST00000410232 287 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 PGBD4P8-201ENST00000412993 562 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 RPL21P108-201ENST00000413857 481 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MTATP6P27-201ENST00000416987 621 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 GLRXP1-201ENST00000423261 334 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC091390.1-201ENST00000433904 331 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 AL353706.1-201ENST00000436728 494 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 LSM1P1-201ENST00000438629 273 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 EPS15P1-201ENST00000448836 336 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC005008.1-201ENST00000456151 612 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 RNA5SP269-201ENST00000459032 137 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 RPL31P50-201ENST00000471002 296 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC104563.1-201ENST00000476147 376 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC108022.1-201ENST00000493466 478 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC083829.1-201ENST00000503756 657 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 RN7SKP234-201ENST00000517173 224 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.89□□□□□ -1.63
HPS3Q969F9 CENPUP2-201ENST00000555897 1186 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC053481.3-201ENST00000577881 843 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MIR4458-201ENST00000578872 75 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MIR4284-201ENST00000578924 81 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 AC008759.1-201ENST00000589783 983 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC022146.1-201ENST00000595307 847 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 PRELID3BP8-201ENST00000604148 295 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.89□□□□□ -1.63
HPS3Q969F9 AC097468.3-201ENST00000607956 456 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC239868.4-201ENST00000608318 671 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC012409.3-201ENST00000611343 981 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC025594.3-201ENST00000613068 790 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 AC092656.1-203ENST00000624134 423 ntBASIC4.89□□□□□ -1.63
HPS3Q969F9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.89□□□□□ -1.63
HPS3Q969F9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
HPS3Q969F9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HPS3Q969F9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
HPS3Q969F9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HPS3Q969F9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 ZNF734P-201ENST00000419494 1534 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms