Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL133457.1-201ENST00000564251 987 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC022655.2-201ENST00000577280 318 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC245036.5-201ENST00000596330 847 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 MRPS35P3-201ENST00000603189 709 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AL031176.1-201ENST00000604554 466 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC114878.2-201ENST00000604863 1251 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC106028.5-201ENST00000610332 395 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC114781.5-201ENST00000615297 108 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC011944.2-201ENST00000624440 683 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 AC120349.2-201ENST00000625002 298 ntBASIC3.66□□□□□ -1.82
PTP4A1Q93096 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTP4A1Q93096 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTP4A1Q93096 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.66□□□□□ -1.82
PTP4A1Q93096 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.65□□□□□ -1.82
PTP4A1Q93096 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PTP4A1Q93096 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTP4A1Q93096 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTP4A1Q93096 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 RNU4-25P-201ENST00000410569 230 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 RN7SKP182-201ENST00000410772 298 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 RPL30P2-201ENST00000414021 291 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 CHIAP3-201ENST00000423668 1133 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 RPL18P10-201ENST00000425606 538 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 SNRPEP4-201ENST00000435815 279 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AL589880.1-201ENST00000448271 287 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 RNA5SP246-201ENST00000458909 119 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 RPS15AP17-201ENST00000470598 390 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC104982.1-201ENST00000478775 574 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 HSPA8P13-201ENST00000523715 472 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC105233.3-201ENST00000531125 744 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 GNRHR2P1-201ENST00000555315 631 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC022968.1-201ENST00000567372 442 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 LARP7P2-201ENST00000575306 125 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC053481.3-201ENST00000577881 843 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 IPO5P1-202ENST00000600039 287 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AL161729.3-201ENST00000603533 673 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC073348.1-201ENST00000623002 331 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 CRYM-AS1-204ENST00000637983 556 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 MIR1322-201ENST00000638013 71 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC097714.1-201ENST00000511272 1647 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 BDP1P-201ENST00000582658 1990 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 MTND4P9-201ENST00000507819 1346 ntBASIC3.65□□□□□ -1.83
PTP4A1Q93096 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PTP4A1Q93096 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTP4A1Q93096 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTP4A1Q93096 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTP4A1Q93096 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTP4A1Q93096 OR4G11P-202ENST00000642116 1414 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.64□□□□□ -1.83
PTP4A1Q93096 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTP4A1Q93096 SNRPEP3-201ENST00000338402 276 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTP4A1Q93096 SNORA56-201ENST00000383966 129 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 MTATP6P27-201ENST00000416987 621 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.64□□□□□ -1.83
PTP4A1Q93096 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.64□□□□□ -1.83
PTP4A1Q93096 AC087650.1-201ENST00000431445 468 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 MTND2P5-201ENST00000432656 1006 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 NEK4P1-201ENST00000433383 879 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 KCTD9P3-201ENST00000434597 1169 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 RPS3AP54-201ENST00000435535 734 ntBASIC3.64□□□□□ -1.83
PTP4A1Q93096 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.64□□□□□ -1.83
PTP4A1Q93096 AC073143.1-201ENST00000436316 395 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms