Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AC007619.2-201ENST00000605743 379 ntBASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 BX322635.1-201ENST00000605804 496 ntBASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AL354696.1-201ENST00000614652 497 ntBASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM3Q8TF72 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AL390023.1-201ENST00000428836 262 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 RSL24D1P8-201ENST00000434442 492 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC093278.1-201ENST00000494700 600 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 PCNAP1-201ENST00000505363 709 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC017037.2-201ENST00000513850 890 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC122134.1-201ENST00000565664 1104 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC017002.4-201ENST00000604721 1525 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 PLCE1P1-201ENST00000622094 305 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 FRG1DP-201ENST00000635586 771 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC009313.2-201ENST00000417893 1941 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 RNU6-984P-201ENST00000363236 109 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 RNA5SP274-201ENST00000410484 108 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 RNA5SP247-201ENST00000411181 105 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 MTND4LP21-201ENST00000415303 295 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 TRIM60P13-201ENST00000432350 1283 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 EEF1B2P7-201ENST00000451177 676 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 RPL21P41-201ENST00000459863 264 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AL121839.1-201ENST00000556233 1185 ntBASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.96□□□□□ -1.94
SHROOM3Q8TF72 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AL450326.2-201ENST00000421913 1962 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 RNU6-152P-201ENST00000384037 107 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC234781.4-201ENST00000419384 244 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 ARL5AP4-201ENST00000430731 512 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 HMGB1P25-201ENST00000468402 607 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 RNU6-319P-201ENST00000516025 108 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AP000916.1-201ENST00000533869 835 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC000403.1-201ENST00000613696 3585 ntBASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHROOM3Q8TF72 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 OR5T3-201ENST00000303059 1023 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC069218.2-201ENST00000411665 344 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 TPRKBP1-201ENST00000456243 481 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 RFPL4AP3-201ENST00000515267 345 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 RNU6-760P-201ENST00000516078 97 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC026790.2-201ENST00000606282 430 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL590410.1-201ENST00000617925 333 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 EI24P2-201ENST00000397776 1076 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 MTCO1P57-201ENST00000432182 261 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC009969.1-201ENST00000438726 172 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 HMGB1P5-202ENST00000451497 985 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 CACYBPP2-201ENST00000453625 678 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms