Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU7-27P-201ENST00000459281 62 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RPS3AP17-201ENST00000472594 777 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 LARP1BP2-201ENST00000486594 519 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MTCO1P30-201ENST00000515244 580 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SNORA67.7-201ENST00000516664 135 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RPL23AP53-201ENST00000521854 457 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 OR4A45P-201ENST00000529954 901 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AP004247.1-201ENST00000531556 1289 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 CYCSP2-201ENST00000558168 301 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC006960.3-201ENST00000561845 705 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RN7SL435P-201ENST00000584418 282 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 VN1R79P-201ENST00000593540 513 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC027807.2-201ENST00000616099 408 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AP001005.3-201ENST00000622049 129 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC083843.3-201ENST00000623679 2186 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RLIMP2-201ENST00000427891 1563 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC008033.1-201ENST00000216407 1162 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-492P-201ENST00000363035 104 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RNU5E-5P-201ENST00000365379 116 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 SNORA40.3-201ENST00000390964 122 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 MIR1271-201ENST00000408537 86 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL136133.1-201ENST00000413694 376 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC138393.2-201ENST00000414742 246 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL451062.2-201ENST00000427515 271 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC073335.1-201ENST00000427776 363 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL132765.1-201ENST00000434165 553 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RPL35AP21-201ENST00000437667 333 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 MTND4LP16-201ENST00000440828 295 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 TPT1P14-201ENST00000448018 505 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RPL26P28-201ENST00000451325 435 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC092001.1-201ENST00000453012 261 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC091564.1-201ENST00000464563 479 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC053481.1-201ENST00000467217 306 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC027309.2-201ENST00000520566 192 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 DEFB131D-201ENST00000526803 184 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC104383.1-201ENST00000530297 370 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-88P-201ENST00000606801 100 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC012150.2-201ENST00000621300 544 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC124864.2-201ENST00000624736 186 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 OR5BR1P-201ENST00000524992 1330 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC44A3Q8N4M1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms