Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC091180.1-201ENST00000462104 372 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AP000893.1-201ENST00000474462 794 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RPL39P36-201ENST00000490784 156 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC107934.1-201ENST00000522215 217 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AP001429.1-201ENST00000602568 530 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 Z84480.1-201ENST00000605131 311 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC093799.2-201ENST00000610062 578 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 A2MP1-204ENST00000566278 4130 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RNU6-451P-201ENST00000362921 107 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 OR1L6-202ENST00000373684 1044 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AL356421.1-201ENST00000403255 413 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RN7SKP114-201ENST00000410327 279 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RN7SKP125-201ENST00000410481 302 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RPL31P45-201ENST00000419532 356 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 SDCBPP3-201ENST00000419629 891 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 SNRPEP10-201ENST00000420249 274 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC234779.1-201ENST00000425910 285 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 NOP56P2-201ENST00000447491 769 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AL136380.1-201ENST00000447970 162 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RN7SL443P-201ENST00000464331 290 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 BX284632.1-201ENST00000478218 541 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 NDUFB5P1-201ENST00000508134 564 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 ARL2BPP2-201ENST00000550907 489 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 RN7SL290P-201ENST00000578661 300 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC025449.1-201ENST00000603896 529 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AL355472.4-201ENST00000610233 626 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC135507.2-201ENST00000612443 309 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC006504.8-201ENST00000621046 635 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 AC074140.1-201ENST00000621617 208 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 CYP3A51P-201ENST00000633513 256 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 PCAT14-202ENST00000627127 3935 ntBASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM48Q8IWZ4 ZNF652P1-201ENST00000442420 1309 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 RNU4-1-201ENST00000363925 141 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 RNY4P16-201ENST00000364768 94 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 RNU6-878P-201ENST00000384578 110 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 SNORA66-201ENST00000384792 133 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 RNA5SP241-201ENST00000391326 114 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 AL024474.1-201ENST00000404655 591 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 RNU2-9P-201ENST00000410194 145 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 AC069218.2-201ENST00000411665 344 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 CTSL3P-202ENST00000412179 788 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 MRPL50P2-201ENST00000416821 482 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5□□□□□ -1.61
TRIM48Q8IWZ4 AL031736.2-201ENST00000426573 787 ntBASIC5□□□□□ -1.61
TRIM48Q8IWZ4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms