Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RNY3P9-201ENST00000384727 106 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AL356131.1-201ENST00000405826 414 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RPEP2-201ENST00000432149 701 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RPL23AP33-201ENST00000442301 452 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RPL5P30-201ENST00000465511 891 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 LINC00888-204ENST00000487386 421 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC005798.1-201ENST00000513715 387 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 HNRNPKP5-201ENST00000515300 253 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 OR4R3P-201ENST00000525084 838 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 UBE2NP1-201ENST00000545592 458 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 OR6C73P-201ENST00000546432 358 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC112220.3-201ENST00000605502 502 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 Z98200.1-201ENST00000607298 470 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC080013.4-201ENST00000607624 649 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC084757.4-201ENST00000616350 526 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AL136981.2-201ENST00000617319 734 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 MIR7151-201ENST00000617477 60 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 MTND4P26-201ENST00000415971 1359 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC068254.2-201ENST00000623938 3577 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 SNORA9-201ENST00000384215 133 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MIR124-3-201ENST00000384866 87 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MIR483-201ENST00000385070 76 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 EIF5P1-201ENST00000400019 1231 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 RPS12P23-201ENST00000419579 400 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MTND4P20-201ENST00000424125 869 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AL691449.1-201ENST00000426570 421 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 RPL23AP35-201ENST00000451906 501 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 PLGLA-201ENST00000465668 449 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 RPS29P19-201ENST00000479709 171 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC021146.8-201ENST00000507455 733 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 XKRY-201ENST00000510392 1100 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 PTGES3P3-201ENST00000511479 482 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AP000889.1-201ENST00000530968 660 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 HSPE1P3-201ENST00000559254 309 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 RPL23AP92-201ENST00000603609 255 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC025588.3-201ENST00000604182 274 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC007179.3-201ENST00000604976 235 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AL450489.1-201ENST00000612071 468 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC012314.7-201ENST00000619693 93 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC009318.4-201ENST00000620496 486 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AP003485.2-201ENST00000623636 610 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AC120349.3-201ENST00000624377 529 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 U6.101-201ENST00000637707 76 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 SGO1P2-201ENST00000429458 1589 ntBASIC4.51□□□□□ -1.69
HERC6Q8IVU3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HERC6Q8IVU3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HERC6Q8IVU3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms