Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC092490.3-201ENST00000545370 572 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC093027.1-201ENST00000546698 429 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC087477.6-201ENST00000559595 843 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC055876.1-202ENST00000567053 138 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AL162431.4-201ENST00000604674 411 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 BNIP3P10-201ENST00000605360 577 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 DISC2.1-201ENST00000612827 205 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 DDX18P3-201ENST00000404856 2007 ntBASIC5.86□□□□□ -1.47
NPAS4Q8IUM7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC068870.1-201ENST00000563737 2455 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 HSPE1P11-201ENST00000339579 310 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RNU5E-8P-201ENST00000363502 116 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RN7SKP103-201ENST00000363848 320 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 OR4K12P-201ENST00000406538 961 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RN7SKP126-201ENST00000411143 300 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL137014.1-201ENST00000420490 1226 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RPL23AP30-201ENST00000432419 501 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL606489.2-201ENST00000433886 234 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RPL23AP33-201ENST00000442301 452 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL121871.1-201ENST00000443413 436 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RPL21P89-201ENST00000444021 467 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RPL36AP13-201ENST00000457490 317 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RPL21P103-201ENST00000479921 488 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 TMEM248P1-201ENST00000510579 951 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 RNU6-327P-201ENST00000516270 127 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 SNORA40.12-201ENST00000516329 111 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 PHBP17-201ENST00000528576 541 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC024940.3-201ENST00000538551 316 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC011447.4-201ENST00000587562 111 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL360085.1-201ENST00000604713 532 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC100827.5-201ENST00000615883 426 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.85□□□□□ -1.47
NPAS4Q8IUM7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 OR4F13P-202ENST00000560066 2054 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC108751.5-201ENST00000492880 1336 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 RNU6-223P-201ENST00000362830 107 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 Y_RNA.86-201ENST00000363020 111 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 SNORA69-201ENST00000383895 132 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 Y_RNA.419-201ENST00000384041 102 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 RNU6-606P-201ENST00000384721 111 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MIR153-1-201ENST00000384914 90 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 RNU11-4P-201ENST00000391149 133 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC016712.1-201ENST00000431088 378 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 GTF2IP20-201ENST00000431663 360 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 CKS1BP5-201ENST00000434172 273 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms