Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AL133153.1-201ENST00000557756 303 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC069061.3-201ENST00000582254 823 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC092747.3-201ENST00000603769 301 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC025588.3-201ENST00000604182 274 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 IMMP1LP3-201ENST00000604197 224 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 FAM27E4-201ENST00000605259 342 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC083806.3-201ENST00000614016 455 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC025034.2-201ENST00000623264 286 ntBASIC6.33□□□□□ -1.4
RNF135Q8IUD6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF135Q8IUD6 AC018628.1-201ENST00000624147 3819 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC024651.2-201ENST00000562480 2098 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL122126.1-201ENST00000546905 1318 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC010329.2-201ENST00000595195 2737 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 BDP1P-201ENST00000582658 1990 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.135-201ENST00000363439 95 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 SNORD115-7-201ENST00000365306 82 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL049697.2-201ENST00000403708 294 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 MIR1286-201ENST00000408112 78 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 RNU2-36P-201ENST00000410361 191 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 HMGB3P2-201ENST00000411913 584 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 BMS1P17-202ENST00000416720 316 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL451139.1-201ENST00000434718 346 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL035666.1-201ENST00000446195 348 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC104634.1-201ENST00000452720 462 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 UBA52P7-201ENST00000486088 380 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 RNU6-764P-201ENST00000516396 105 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 FAM60DP-201ENST00000524174 632 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC063949.1-201ENST00000552900 865 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL627230.1-201ENST00000613077 211 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL136313.1-201ENST00000624804 202 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC008013.2-202ENST00000637965 364 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AC011416.1-201ENST00000514947 1732 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF135Q8IUD6 AL662795.2-201ENST00000624252 3706 ntBASIC6.32□□□□□ -1.4
RNF135Q8IUD6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 MTND5P27-201ENST00000428871 1720 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 RN7SKP124-201ENST00000364730 341 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 EIF4E2P1-201ENST00000393781 255 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL645927.1-201ENST00000396783 406 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 HMGB1P20-201ENST00000402555 677 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL133270.1-201ENST00000402635 279 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 SNRPEP6-201ENST00000407465 277 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 POLHP1-201ENST00000411806 470 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC127537.2-201ENST00000439258 465 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 REG1CP-206ENST00000447469 496 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL596266.1-201ENST00000448132 400 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 MTND1P17-201ENST00000448961 204 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 MIR2053-201ENST00000459295 91 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms