Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC063950.1-201ENST00000552036 308 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL049874.4-201ENST00000557593 255 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 RPS3AP23-202ENST00000574601 686 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC015871.2-201ENST00000603605 948 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL355598.1-201ENST00000604169 202 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL592494.3-201ENST00000609485 464 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL138478.1-201ENST00000612252 832 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AL139418.1-201ENST00000613613 177 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC090574.1-201ENST00000623186 233 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 AC116667.1-201ENST00000604855 2072 ntBASIC4.34□□□□□ -1.71
BHLHA9Q7RTU4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
BHLHA9Q7RTU4 A2MP1-204ENST00000566278 4130 ntBASIC4.34□□□□□ -1.72
BHLHA9Q7RTU4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 RNU4-12P-201ENST00000365233 139 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 Y_RNA.460-201ENST00000384255 102 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 SNORA75.4-201ENST00000391278 119 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 RPS26P8-201ENST00000393490 348 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 CIR1P3-201ENST00000405137 479 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL139039.2-201ENST00000407436 479 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC098592.1-201ENST00000419352 333 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 SDCBPP3-201ENST00000419629 891 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC092427.1-201ENST00000439177 601 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 MRPL42P4-201ENST00000453267 443 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC021678.1-201ENST00000505195 936 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC112518.2-201ENST00000508565 425 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC090695.1-201ENST00000561269 1222 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 MIR432-201ENST00000606207 94 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL031666.3-201ENST00000609320 1006 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC015722.2-201ENST00000622210 551 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC068724.3-201ENST00000625906 87 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AL022322.2-201ENST00000624072 20397 ntBASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHA9Q7RTU4 AC093775.1-201ENST00000624154 1868 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 Z99496.1-201ENST00000469424 1477 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 MIR372-201ENST00000362225 67 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RNU4-79P-201ENST00000362764 141 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RNU6-259P-201ENST00000383999 107 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RNU6-463P-201ENST00000384340 107 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 SNORA37-201ENST00000384504 129 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RPS27AP12-201ENST00000429552 465 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 YWHAZP7-201ENST00000436906 631 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 GDI2P2-201ENST00000445131 608 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 PAXBP1P1-201ENST00000449315 447 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 KATNBL1P6-201ENST00000453433 915 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 RPL31P53-201ENST00000457065 348 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC007537.2-201ENST00000472093 511 ntBASIC4.32□□□□□ -1.72
BHLHA9Q7RTU4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms