Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC022616.6-201ENST00000520479 119 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC079075.1-201ENST00000559543 878 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC053481.3-201ENST00000577881 843 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC090616.5-202ENST00000582111 297 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 OR10AB1P-201ENST00000609613 938 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AL020991.1-201ENST00000612314 373 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC009237.17-201ENST00000618111 748 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC009159.1-201ENST00000618386 642 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 MIR7703-201ENST00000620784 77 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-156P-201ENST00000621869 107 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AP006248.2-201ENST00000623309 592 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AL592148.3-201ENST00000608771 2646 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC000374.1-201ENST00000434698 1745 ntBASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RUFY4Q6ZNE9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-1090P-201ENST00000364065 94 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC006210.2-201ENST00000367074 1545 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-877P-201ENST00000383868 107 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-780P-201ENST00000391030 104 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-876P-201ENST00000391295 104 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AL049693.1-201ENST00000402760 611 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AL603766.1-201ENST00000407763 664 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC073136.2-201ENST00000417282 849 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 HMGB3P20-201ENST00000417997 600 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 MTND4P12-201ENST00000498999 1377 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 Vault.3-201ENST00000516676 95 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC107954.1-201ENST00000565906 727 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC099489.2-201ENST00000574976 260 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AP005119.2-201ENST00000579735 1105 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 MIR4737-201ENST00000583979 81 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC060780.3-201ENST00000589464 80 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 NRBF2P5-201ENST00000603087 788 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC104260.1-201ENST00000616660 539 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 AC022140.2-201ENST00000623500 188 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RUFY4Q6ZNE9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AL731566.1-201ENST00000620490 1937 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 KPNA2P2-201ENST00000419546 1489 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-181P-201ENST00000363225 107 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 SSXP10-201ENST00000402595 565 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 RNU6-603P-201ENST00000411403 107 ntBASIC5.6□□□□□ -1.51
RUFY4Q6ZNE9 AC069218.2-201ENST00000411665 344 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms