Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-77P-201ENST00000410554 91 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 Z99755.1-201ENST00000414048 380 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC246680.2-201ENST00000422106 389 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 NIPA2P1-201ENST00000426223 976 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 RRM2P4-201ENST00000441721 562 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC044797.1-201ENST00000445744 679 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RPL23AP15-201ENST00000450202 459 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC233982.1-201ENST00000451247 436 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 PRDX3P4-201ENST00000470828 747 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RPS4XP13-201ENST00000483219 789 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC112198.4-201ENST00000515450 351 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AP003355.1-201ENST00000518956 587 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AF279873.1-201ENST00000523393 313 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 MTND2P26-201ENST00000528255 1029 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 AL451086.1-201ENST00000605596 223 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC078880.5-201ENST00000617845 421 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC068831.8-201ENST00000620171 435 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFX4Q33E94 MIR4496-201ENST00000635896 61 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 AC119674.1-207ENST00000641355 633 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFX4Q33E94 MTCO1P24-201ENST00000515438 1558 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RFX4Q33E94 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RFX4Q33E94 U3.6-201ENST00000363622 211 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 RNA5SP515-201ENST00000364570 118 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 RNU6-468P-201ENST00000384003 109 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 U8.11-201ENST00000384699 133 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 U8.12-201ENST00000384701 133 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC007066.1-201ENST00000392902 381 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RFX4Q33E94 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 ATP5A1P2-201ENST00000412323 255 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 PAICSP7-201ENST00000419829 962 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 RPL21P112-201ENST00000434403 463 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 HMGN1P5-201ENST00000448591 263 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 PTGES3P5-201ENST00000455109 434 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 BX248409.1-201ENST00000455497 255 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 HMGN2P16-201ENST00000456802 261 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 snoU13.7-201ENST00000459220 104 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 U8.18-201ENST00000459285 133 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 ST13P14-201ENST00000474095 734 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 RN7SL283P-201ENST00000489055 303 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 HMGN1P11-201ENST00000508668 303 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 PRELID3BP4-201ENST00000515476 571 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC004217.3-201ENST00000551552 878 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC011611.5-201ENST00000552477 578 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
RFX4Q33E94 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC090079.2-201ENST00000575289 768 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 VN1R88P-201ENST00000596787 292 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 U1.23-201ENST00000610293 146 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AL359535.1-201ENST00000612100 1087 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC024941.1-201ENST00000612250 334 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms