Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC092045.1-201ENST00000495716 1231 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 RNA5SP24-201ENST00000516478 95 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 RN7SKP283-201ENST00000517197 270 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 SERPINE4P-201ENST00000554978 281 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC000123.2-201ENST00000623124 461 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1SQ13698 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1SQ13698 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 ZNF658B-202ENST00000615961 3375 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 MTCO1P39-201ENST00000426148 480 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC125238.1-201ENST00000448842 249 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 NDUFS5P3-201ENST00000450668 321 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 snoU13.15-201ENST00000459407 104 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 RN7SL75P-201ENST00000461926 281 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC003982.1-202ENST00000469928 248 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC093663.2-201ENST00000484625 313 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 RN7SL633P-201ENST00000488974 297 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC068657.1-201ENST00000520807 306 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1SQ13698 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1SQ13698 AC066616.2-201ENST00000559334 1481 ntBASIC3.43□□□□□ -1.86
CACNA1SQ13698 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1SQ13698 OR10AB1P-202ENST00000641219 1686 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1SQ13698 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CACNA1SQ13698 VN1R96P-201ENST00000446052 858 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1SQ13698 snoU13.26-201ENST00000459452 105 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 SEPT7P6-201ENST00000469999 1143 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AC126121.1-201ENST00000482313 553 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 RNA5SP320-201ENST00000516263 124 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AC011492.1-201ENST00000600023 315 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AL450472.3-201ENST00000615578 367 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AL589935.2-201ENST00000616471 1231 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 AL355493.4-201ENST00000618530 292 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 MIR7843-201ENST00000622274 79 ntBASIC3.42□□□□□ -1.86
CACNA1SQ13698 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1SQ13698 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1SQ13698 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 RNU1-35P-201ENST00000362782 153 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 MIR887-201ENST00000401258 79 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 RPS29P6-201ENST00000438196 145 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 CBX1P4-201ENST00000439415 457 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 CACYBPP2-201ENST00000453625 678 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC117522.3-201ENST00000507974 584 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 RNA5SP148-201ENST00000516527 94 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AP003122.3-201ENST00000526316 255 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC090312.2-201ENST00000582687 378 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1SQ13698 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 RNA5SP274-201ENST00000410484 108 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 FTH1P6-201ENST00000430768 320 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC234775.3-201ENST00000564612 656 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 MIR4512-201ENST00000583257 77 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 MIR6817-201ENST00000615588 66 ntBASIC3.41□□□□□ -1.86
CACNA1SQ13698 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CACNA1SQ13698 AC116096.1-201ENST00000566804 2314 ntBASIC3.4□□□□□ -1.86
CACNA1SQ13698 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.4□□□□□ -1.86
CACNA1SQ13698 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CACNA1SQ13698 U8.2-201ENST00000363156 134 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 RPL31P1-201ENST00000398116 372 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 AC233981.1-201ENST00000423224 461 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 AC092013.1-201ENST00000438795 332 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 AL354710.1-201ENST00000453641 246 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.4□□□□□ -1.87
CACNA1SQ13698 AC243972.3-201ENST00000539655 198 ntBASIC3.4□□□□□ -1.87
CACNA1SQ13698 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.4□□□□□ -1.87
CACNA1SQ13698 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CACNA1SQ13698 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CACNA1SQ13698 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 PTP4A1P5-201ENST00000420305 455 ntBASIC3.39□□□□□ -1.87
CACNA1SQ13698 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.39□□□□□ -1.87
CACNA1SQ13698 B3GNT2P1-201ENST00000434960 952 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms