Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.93□□□□□ -1.78
GABPAQ06546 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GABPAQ06546 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
GABPAQ06546 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
GABPAQ06546 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC025263.3-201ENST00000622965 1396 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 RNU1-70P-201ENST00000362618 164 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 RNU6-353P-201ENST00000364266 108 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 RNU6-1176P-201ENST00000390955 107 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 RNU6-1000P-201ENST00000391066 106 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 RNA5SP239-201ENST00000410218 129 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC008280.1-201ENST00000418851 412 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC011242.1-201ENST00000433596 1158 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC097262.1-201ENST00000452559 548 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.92□□□□□ -1.78
GABPAQ06546 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC110794.1-201ENST00000505816 425 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.92□□□□□ -1.78
GABPAQ06546 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.92□□□□□ -1.78
GABPAQ06546 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.92□□□□□ -1.78
GABPAQ06546 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.92□□□□□ -1.78
GABPAQ06546 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.92□□□□□ -1.78
GABPAQ06546 AL049777.1-201ENST00000622740 518 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 AC009452.1-201ENST00000640823 606 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.92□□□□□ -1.78
GABPAQ06546 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
GABPAQ06546 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
GABPAQ06546 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
GABPAQ06546 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
GABPAQ06546 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 AL136116.1-201ENST00000403591 381 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC096533.1-201ENST00000411645 353 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC004987.3-201ENST00000413879 771 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 PAICSP7-201ENST00000419829 962 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AL009174.1-201ENST00000426577 416 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.91□□□□□ -1.78
GABPAQ06546 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC234064.1-201ENST00000436312 247 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 SEPT14P24-201ENST00000447236 180 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC008264.1-201ENST00000447612 367 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.91□□□□□ -1.78
GABPAQ06546 MTCO3P16-201ENST00000454456 754 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.91□□□□□ -1.78
GABPAQ06546 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 AC017015.1-201ENST00000477387 286 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC126121.1-201ENST00000482313 553 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 RPS27P23-201ENST00000487608 251 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 AF279873.1-201ENST00000523393 313 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.91□□□□□ -1.78
GABPAQ06546 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.91□□□□□ -1.78
GABPAQ06546 AL161713.1-201ENST00000555538 145 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 MTCO1P40-201ENST00000574371 625 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.91□□□□□ -1.78
GABPAQ06546 AC067852.4-201ENST00000590314 478 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.91□□□□□ -1.78
GABPAQ06546 BNIP3P27-201ENST00000599991 412 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 VN1R74P-201ENST00000613259 503 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.91□□□□□ -1.78
GABPAQ06546 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
GABPAQ06546 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.91□□□□□ -1.78
GABPAQ06546 AC139713.2-210ENST00000641741 992 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.91□□□□□ -1.78
GABPAQ06546 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 ZNF833P-201ENST00000424938 1494 ntBASIC3.91□□□□□ -1.78
GABPAQ06546 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
GABPAQ06546 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GABPAQ06546 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
GABPAQ06546 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GABPAQ06546 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
GABPAQ06546 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GABPAQ06546 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
GABPAQ06546 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
GABPAQ06546 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
GABPAQ06546 SNORA48.2-201ENST00000390926 124 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 MCTS2P-201ENST00000394552 546 ntBASIC3.9□□□□□ -1.79
GABPAQ06546 TAF9BP1-201ENST00000396646 746 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms