Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 DUXAP2-201ENST00000519198 589 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC113192.3-201ENST00000529152 742 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 AL162713.1-201ENST00000604480 262 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 HMGN2P28-201ENST00000606102 262 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 MIR92B-201ENST00000607575 96 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC096586.1-201ENST00000610267 561 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AL392048.1-201ENST00000613946 534 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 MIR8058-201ENST00000615737 89 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 RNU6-156P-201ENST00000621869 107 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC132825.7-201ENST00000638744 335 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 MTCO1P4-201ENST00000520516 1409 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AL049781.1-201ENST00000623195 3585 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS1Q01581 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS1Q01581 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 MTCO3P31-201ENST00000405526 789 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 BX664727.1-201ENST00000416024 466 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC012065.2-201ENST00000421295 375 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 GTF2IP23-201ENST00000423746 351 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 BX890604.2-201ENST00000427883 474 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC093422.3-201ENST00000428506 305 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 OR51AB1P-201ENST00000429046 620 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 HMGB1P45-201ENST00000435986 653 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AL358232.1-201ENST00000448030 501 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 DNAJC19P8-201ENST00000452887 259 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 RPL32P14-201ENST00000463196 378 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AP000893.1-201ENST00000474462 794 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 NCOR1P1-202ENST00000486162 291 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 RPL7P38-201ENST00000488396 739 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 RNU6-467P-201ENST00000517027 110 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC007458.1-201ENST00000542812 373 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 RN7SL622P-201ENST00000585292 275 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC019176.2-201ENST00000611579 315 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC015967.1-201ENST00000619893 476 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS1Q01581 MTCO1P24-201ENST00000515438 1558 ntBASIC3.16□□□□□ -1.9
HMGCS1Q01581 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCS1Q01581 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HMGCS1Q01581 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
HMGCS1Q01581 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMGCS1Q01581 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HMGCS1Q01581 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.9
HMGCS1Q01581 SEC63P2-201ENST00000503863 1939 ntBASIC3.15□□□□□ -1.9
HMGCS1Q01581 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMGCS1Q01581 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 MIR7-3-201ENST00000384898 110 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 MIR183-201ENST00000384958 110 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AL355379.1-201ENST00000405542 640 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AIMP1P1-201ENST00000418670 937 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 MTND2P16-201ENST00000419987 799 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 ATP5C1P1-201ENST00000441945 895 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 MOB1AP2-201ENST00000446060 614 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 SETP6-201ENST00000479329 568 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 RPL31P13-201ENST00000484151 370 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC112518.2-201ENST00000508565 425 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms