Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX6-1P78426 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX6-1P78426 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX6-1P78426 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
NKX6-1P78426 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NKX6-1P78426 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.5□□□□□ -1.69
NKX6-1P78426 NMD3P1-201ENST00000439704 1488 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NKX6-1P78426 SNORA62-201ENST00000365493 153 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NKX6-1P78426 MIR589-201ENST00000385238 99 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 OR8V1P-201ENST00000395193 873 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 RPS3AP36-201ENST00000398190 775 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 SNORA11-201ENST00000408789 128 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 RAD23BP2-201ENST00000416003 1207 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 MTND3P21-201ENST00000433774 331 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC009961.2-201ENST00000435771 251 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 PRPF38AP1-201ENST00000451976 933 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 RN7SL385P-201ENST00000468873 276 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC097484.1-201ENST00000471148 389 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 RN7SL814P-201ENST00000487715 300 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 RPS4XP18-201ENST00000495480 763 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX6-1P78426 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 PTGES3P3-201ENST00000511479 482 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC022483.1-201ENST00000514020 567 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AP003122.4-201ENST00000530980 758 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 ZNF519P2-201ENST00000557032 169 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 AL391840.1-201ENST00000571144 367 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX6-1P78426 MIR4270-201ENST00000581799 70 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AC068790.3-201ENST00000602988 553 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 AL049794.2-201ENST00000616301 365 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC009704.2-201ENST00000618739 483 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AL160394.1-201ENST00000624765 724 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AC073869.10-201ENST00000642016 354 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX6-1P78426 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX6-1P78426 MTND5P33-201ENST00000571250 1450 ntBASIC4.49□□□□□ -1.69
NKX6-1P78426 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX6-1P78426 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NKX6-1P78426 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX6-1P78426 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX6-1P78426 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX6-1P78426 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX6-1P78426 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX6-1P78426 RNU6-989P-201ENST00000362756 107 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 RNU4-44P-201ENST00000363050 141 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 U8.3-201ENST00000363321 132 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 RNU1-32P-201ENST00000363937 159 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 RN7SKP226-201ENST00000364912 300 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 RNA5SP455-201ENST00000365190 119 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX6-1P78426 RNA5SP87-201ENST00000384155 118 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NKX6-1P78426 AC078974.1-201ENST00000411597 223 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX6-1P78426 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX6-1P78426 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 ISCA1P1-201ENST00000426679 387 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 AC006548.1-201ENST00000427470 102 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 ISCA1P6-201ENST00000427740 390 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 DNAJC19P7-201ENST00000428811 344 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX6-1P78426 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX6-1P78426 RPS29P10-201ENST00000439197 166 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 DNAJC19P4-201ENST00000440115 345 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 CBX1P1-201ENST00000440184 427 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 MTND1P9-201ENST00000453775 944 ntBASIC4.48□□□□□ -1.69
NKX6-1P78426 AP000942.1-201ENST00000463969 747 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms