Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 USP9YP36-201ENST00000424581 829 ntBASIC2.62□□□□□ -1.99
UBA52P62987 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 RPS27AP1-201ENST00000475545 471 ntBASIC2.62□□□□□ -1.99
UBA52P62987 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.62□□□□□ -1.99
UBA52P62987 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.62□□□□□ -1.99
UBA52P62987 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.62□□□□□ -1.99
UBA52P62987 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
UBA52P62987 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 AC138932.5-201ENST00000617759 563 ntBASIC2.62□□□□□ -1.99
UBA52P62987 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.62□□□□□ -1.99
UBA52P62987 AL590240.3-201ENST00000621416 943 ntBASIC2.62□□□□□ -1.99
UBA52P62987 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UBA52P62987 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
UBA52P62987 OR5BR1P-201ENST00000524992 1330 ntBASIC2.62□□□□□ -1.99
UBA52P62987 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UBA52P62987 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UBA52P62987 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.61□□□□□ -1.99
UBA52P62987 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
UBA52P62987 AL118496.1-201ENST00000440201 1812 ntBASIC2.61□□□□□ -1.99
UBA52P62987 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.61□□□□□ -1.99
UBA52P62987 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
UBA52P62987 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UBA52P62987 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
UBA52P62987 RNA5SP274-201ENST00000410484 108 ntBASIC2.61□□□□□ -1.99
UBA52P62987 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.61□□□□□ -1.99
UBA52P62987 AC008065.1-201ENST00000428525 348 ntBASIC2.61□□□□□ -1.99
UBA52P62987 HIGD1AP11-201ENST00000438361 280 ntBASIC2.61□□□□□ -1.99
UBA52P62987 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
UBA52P62987 RSL24D1P2-201ENST00000445584 366 ntBASIC2.61□□□□□ -1.99
UBA52P62987 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UBA52P62987 AC078918.1-201ENST00000498515 228 ntBASIC2.61□□□□□ -1.99
UBA52P62987 AC010627.1-201ENST00000503819 1294 ntBASIC2.61□□□□□ -1.99
UBA52P62987 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.61□□□□□ -1.99
UBA52P62987 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
UBA52P62987 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.61□□□□□ -1.99
UBA52P62987 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.61□□□□□ -1.99
UBA52P62987 AL121603.1-201ENST00000553815 142 ntBASIC2.61□□□□□ -1.99
UBA52P62987 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.61□□□□□ -1.99
UBA52P62987 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
UBA52P62987 AL035425.3-201ENST00000564206 4996 ntBASIC2.61□□□□□ -1.99
UBA52P62987 OR5H2-201ENST00000355273 945 ntBASIC2.6□□□□□ -1.99
UBA52P62987 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBA52P62987 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
UBA52P62987 RNA5SP189-201ENST00000364920 115 ntBASIC2.6□□□□□ -1.99
UBA52P62987 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBA52P62987 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
UBA52P62987 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBA52P62987 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
UBA52P62987 RPL23AP47-201ENST00000408017 460 ntBASIC2.6□□□□□ -1.99
UBA52P62987 AL451074.5-201ENST00000415894 435 ntBASIC2.6□□□□□ -1.99
UBA52P62987 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.6□□□□□ -1.99
UBA52P62987 RPL35AP12-201ENST00000425362 338 ntBASIC2.6□□□□□ -1.99
UBA52P62987 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.6□□□□□ -1.99
UBA52P62987 ATP5C1P1-201ENST00000441945 895 ntBASIC2.6□□□□□ -1.99
UBA52P62987 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.6□□□□□ -1.99
UBA52P62987 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.6□□□□□ -1.99
UBA52P62987 RPS15AP1-201ENST00000457423 391 ntBASIC2.6□□□□□ -1.99
UBA52P62987 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.6□□□□□ -1.99
UBA52P62987 RPL21P8-201ENST00000465083 535 ntBASIC2.6□□□□□ -1.99
UBA52P62987 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.6□□□□□ -1.99
UBA52P62987 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.6□□□□□ -1.99
UBA52P62987 MTND2P13-201ENST00000577438 1039 ntBASIC2.6□□□□□ -1.99
UBA52P62987 MIR4474-201ENST00000579189 78 ntBASIC2.6□□□□□ -1.99
UBA52P62987 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.6□□□□□ -1.99
UBA52P62987 AC018692.3-201ENST00000623929 123 ntBASIC2.6□□□□□ -1.99
UBA52P62987 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.6□□□□□ -1.99
UBA52P62987 AL137790.1-201ENST00000634283 177 ntBASIC2.6□□□□□ -1.99
UBA52P62987 AC119674.1-212ENST00000641155 993 ntBASIC2.6□□□□□ -1.99
UBA52P62987 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBA52P62987 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBA52P62987 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -1.99
UBA52P62987 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBA52P62987 ANKRD36P1-201ENST00000344424 659 ntBASIC2.59□□□□□ -1.99
UBA52P62987 ARF4P3-201ENST00000397387 509 ntBASIC2.59□□□□□ -1.99
UBA52P62987 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
UBA52P62987 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
UBA52P62987 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.59□□□□□ -1.99
UBA52P62987 HMGN2P20-201ENST00000437531 273 ntBASIC2.59□□□□□ -1.99
UBA52P62987 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
UBA52P62987 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.59□□□□□ -1.99
UBA52P62987 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.59□□□□□ -1.99
UBA52P62987 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.59□□□□□ -1.99
UBA52P62987 RN7SL633P-201ENST00000488974 297 ntBASIC2.59□□□□□ -1.99
UBA52P62987 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.59□□□□□ -1.99
UBA52P62987 AC098799.2-201ENST00000509466 868 ntBASIC2.59□□□□□ -1.99
UBA52P62987 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.59□□□□□ -1.99
UBA52P62987 AP001207.1-201ENST00000524051 481 ntBASIC2.59□□□□□ -1.99
UBA52P62987 PSMA2P1-201ENST00000526365 646 ntBASIC2.59□□□□□ -1.99
UBA52P62987 ELOCP31-201ENST00000540463 467 ntBASIC2.59□□□□□ -1.99
UBA52P62987 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms