Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN18P56856 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN18P56856 OR5T3-201ENST00000303059 1023 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN18P56856 MIR208A-201ENST00000362287 71 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN18P56856 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 ATP5F1P6-201ENST00000402768 767 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 OFD1P18Y-201ENST00000420889 959 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC074367.1-201ENST00000438685 1125 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 RPL26P28-201ENST00000451325 435 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 NPM1P13-201ENST00000452663 865 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN18P56856 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC091153.1-201ENST00000466297 402 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 RPL23AP44-201ENST00000482216 473 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 SETP14-201ENST00000497538 873 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN18P56856 WBP1LP4-201ENST00000505043 344 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC026784.1-201ENST00000507986 352 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 RNU2-27P-201ENST00000516185 142 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN18P56856 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AL845331.3-202ENST00000562856 261 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN18P56856 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN18P56856 MIR5186-201ENST00000577504 120 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 RN7SL339P-201ENST00000580597 296 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN18P56856 AL669831.4-202ENST00000590817 238 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 BNIP3P22-201ENST00000593399 556 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 ELOCP35-201ENST00000604289 336 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 AC096586.1-201ENST00000610267 561 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN18P56856 AC073073.2-201ENST00000609827 2578 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN18P56856 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN18P56856 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN18P56856 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CLDN18P56856 AC116096.1-201ENST00000566804 2314 ntBASIC3.13□□□□□ -1.91
CLDN18P56856 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN18P56856 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN18P56856 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 CEP170P1-201ENST00000502249 4587 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 CR381670.1-201ENST00000624291 1693 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN18P56856 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 SNORA70.4-201ENST00000365509 134 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 MIR34B-201ENST00000385076 84 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLDN18P56856 AL391417.1-201ENST00000404100 426 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 RAD23BP2-201ENST00000416003 1207 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 MTCO3P12-201ENST00000416718 547 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC006946.1-201ENST00000429106 328 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AC097713.2-201ENST00000430199 356 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 ZFAND6P1-201ENST00000434138 605 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 RPS24P6-201ENST00000452670 400 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 MTCO3P16-201ENST00000454456 754 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 snoU13.22-201ENST00000459428 104 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 snoU13.3-201ENST00000459441 104 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN18P56856 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN18P56856 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN18P56856 RNA5SP468-201ENST00000516782 93 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 HIGD1AP6-201ENST00000521833 279 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 IGHV3-76-201ENST00000522465 295 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AP006245.1-201ENST00000522549 120 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN18P56856 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 OR5AP1P-201ENST00000529730 940 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC099489.2-201ENST00000574976 260 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC005412.1-201ENST00000580812 1049 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AP001029.3-201ENST00000588063 596 ntBASIC3.12□□□□□ -1.91
CLDN18P56856 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN18P56856 SRGNP1-201ENST00000603392 451 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms