Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN3P54252 HMGN1P15-201ENST00000513870 295 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 GMPSP1-201ENST00000514075 579 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.8□□□□□ -1.8
ATXN3P54252 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN3P54252 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.8□□□□□ -1.8
ATXN3P54252 AC009101.1-201ENST00000568135 242 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 MIR3690-201ENST00000580266 75 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
ATXN3P54252 MIR5187-201ENST00000583479 76 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 AL669831.4-202ENST00000590817 238 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.8□□□□□ -1.8
ATXN3P54252 AC025588.3-201ENST00000604182 274 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 AC090425.2-201ENST00000608818 501 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
ATXN3P54252 AC073530.2-201ENST00000623987 261 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.8□□□□□ -1.8
ATXN3P54252 BX649567.1-201ENST00000642071 1134 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN3P54252 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN3P54252 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.8□□□□□ -1.8
ATXN3P54252 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATXN3P54252 AL021368.2-201ENST00000606125 5352 ntBASIC3.8□□□□□ -1.8
ATXN3P54252 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATXN3P54252 RNA5SP50-201ENST00000363731 107 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 RNU6-115P-201ENST00000364310 107 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 U1.1-201ENST00000384101 164 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 RNU6-339P-201ENST00000384310 107 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 RNU2-71P-201ENST00000411395 189 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 RPL21P66-201ENST00000426566 466 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 HMGB1P12-201ENST00000438594 598 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC017099.1-201ENST00000448261 1028 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 NDUFA5P7-201ENST00000452914 242 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN3P54252 RPS4XP13-201ENST00000483219 789 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 RPL23AP55-201ENST00000498163 452 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN3P54252 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN3P54252 AC048346.1-201ENST00000510247 144 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 MTCO3P44-201ENST00000510977 541 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN3P54252 RN7SKP244-201ENST00000516513 307 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 AC109635.4-202ENST00000531666 412 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN3P54252 AC022968.1-201ENST00000567372 442 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN3P54252 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN3P54252 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN3P54252 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.79□□□□□ -1.8
ATXN3P54252 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN3P54252 DBF4P1-201ENST00000412976 1892 ntBASIC3.79□□□□□ -1.8
ATXN3P54252 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN3P54252 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN3P54252 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN3P54252 AC010733.2-201ENST00000589496 5702 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN3P54252 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATXN3P54252 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
ATXN3P54252 RNU6-263P-201ENST00000363811 107 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 AC234772.1-201ENST00000377927 937 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 RNU6-207P-201ENST00000384137 107 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATXN3P54252 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATXN3P54252 RPL22P22-201ENST00000395439 379 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 HSPE1P8-201ENST00000406997 288 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.78□□□□□ -1.8
ATXN3P54252 RNU4-78P-201ENST00000410940 126 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.78□□□□□ -1.8
ATXN3P54252 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
ATXN3P54252 AL159987.2-201ENST00000432754 307 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.78□□□□□ -1.8
ATXN3P54252 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN3P54252 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.78□□□□□ -1.8
ATXN3P54252 SNORA59A-201ENST00000459326 152 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 RPL7P24-201ENST00000493052 752 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.78□□□□□ -1.8
ATXN3P54252 OR5H5P-201ENST00000503164 928 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.78□□□□□ -1.8
ATXN3P54252 RNU5A-7P-201ENST00000515979 116 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 RNU6-1073P-201ENST00000517182 106 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ATXN3P54252 ARL2BPP5-201ENST00000523141 481 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN3P54252 OR4R2P-201ENST00000530815 597 ntBASIC3.78□□□□□ -1.8
ATXN3P54252 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms