Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.81□□□□□ -1.96
HTTP42858 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HTTP42858 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HTTP42858 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
HTTP42858 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HTTP42858 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.8□□□□□ -1.96
HTTP42858 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.8□□□□□ -1.96
HTTP42858 snoU13.18-201ENST00000459483 104 ntBASIC2.8□□□□□ -1.96
HTTP42858 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.8□□□□□ -1.96
HTTP42858 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.8□□□□□ -1.96
HTTP42858 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HTTP42858 AC091564.4-201ENST00000533934 2194 ntBASIC2.8□□□□□ -1.96
HTTP42858 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.8□□□□□ -1.96
HTTP42858 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HTTP42858 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HTTP42858 SKINT1L-201ENST00000401057 817 ntBASIC2.8□□□□□ -1.96
HTTP42858 AC006539.3-201ENST00000454258 129 ntBASIC2.8□□□□□ -1.96
HTTP42858 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
HTTP42858 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.8□□□□□ -1.96
HTTP42858 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HTTP42858 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HTTP42858 AC138915.3-201ENST00000562908 1389 ntBASIC2.8□□□□□ -1.96
HTTP42858 ZNF603P-201ENST00000405613 487 ntBASIC2.79□□□□□ -1.96
HTTP42858 MTCO3P20-201ENST00000454926 688 ntBASIC2.79□□□□□ -1.96
HTTP42858 AC068587.2-201ENST00000478386 781 ntBASIC2.79□□□□□ -1.96
HTTP42858 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.79□□□□□ -1.96
HTTP42858 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.79□□□□□ -1.96
HTTP42858 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.79□□□□□ -1.96
HTTP42858 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.79□□□□□ -1.96
HTTP42858 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.79□□□□□ -1.96
HTTP42858 RPL32P35-201ENST00000415214 394 ntBASIC2.79□□□□□ -1.96
HTTP42858 AC112673.1-201ENST00000513168 575 ntBASIC2.79□□□□□ -1.96
HTTP42858 AL109741.3-201ENST00000561748 592 ntBASIC2.79□□□□□ -1.96
HTTP42858 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.79□□□□□ -1.96
HTTP42858 MIR6845-201ENST00000613182 61 ntBASIC2.79□□□□□ -1.96
HTTP42858 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HTTP42858 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HTTP42858 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.79□□□□□ -1.96
HTTP42858 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 U8.13-201ENST00000390842 128 ntBASIC2.79□□□□□ -1.96
HTTP42858 AC069218.2-201ENST00000411665 344 ntBASIC2.79□□□□□ -1.96
HTTP42858 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.79□□□□□ -1.96
HTTP42858 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
HTTP42858 AC107222.1-201ENST00000510899 637 ntBASIC2.79□□□□□ -1.96
HTTP42858 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.79□□□□□ -1.96
HTTP42858 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HTTP42858 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
HTTP42858 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HTTP42858 RNA5SP88-201ENST00000365560 109 ntBASIC2.78□□□□□ -1.96
HTTP42858 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
HTTP42858 AL121882.1-201ENST00000422893 417 ntBASIC2.78□□□□□ -1.96
HTTP42858 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.78□□□□□ -1.96
HTTP42858 AL591623.2-201ENST00000449978 222 ntBASIC2.78□□□□□ -1.96
HTTP42858 AC004801.2-202ENST00000463559 283 ntBASIC2.78□□□□□ -1.96
HTTP42858 AC090695.1-201ENST00000561269 1222 ntBASIC2.78□□□□□ -1.96
HTTP42858 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.78□□□□□ -1.96
HTTP42858 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
HTTP42858 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.78□□□□□ -1.96
HTTP42858 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.78□□□□□ -1.96
HTTP42858 CUL1P1-201ENST00000509510 2425 ntBASIC2.78□□□□□ -1.96
HTTP42858 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 MTND5P28-201ENST00000438005 1594 ntBASIC2.78□□□□□ -1.96
HTTP42858 AP000526.1-201ENST00000603308 1388 ntBASIC2.78□□□□□ -1.96
HTTP42858 EI24P2-201ENST00000397776 1076 ntBASIC2.78□□□□□ -1.96
HTTP42858 BTG3P1-201ENST00000435859 716 ntBASIC2.78□□□□□ -1.96
HTTP42858 MTCO3P11-201ENST00000455103 774 ntBASIC2.78□□□□□ -1.96
HTTP42858 PRELID3BP7-201ENST00000503606 469 ntBASIC2.78□□□□□ -1.96
HTTP42858 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.78□□□□□ -1.96
HTTP42858 CKS1BP1-201ENST00000555221 240 ntBASIC2.78□□□□□ -1.96
HTTP42858 AL359715.5-201ENST00000623431 443 ntBASIC2.78□□□□□ -1.96
HTTP42858 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HTTP42858 AC010300.1-201ENST00000600671 5134 ntBASIC2.78□□□□□ -1.96
HTTP42858 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HTTP42858 TTC39DP-201ENST00000416781 1688 ntBASIC2.78□□□□□ -1.96
HTTP42858 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
HTTP42858 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
HTTP42858 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HTTP42858 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HTTP42858 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HTTP42858 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HTTP42858 AL023284.1-201ENST00000403956 276 ntBASIC2.77□□□□□ -1.97
HTTP42858 AC245291.1-201ENST00000419501 328 ntBASIC2.77□□□□□ -1.97
HTTP42858 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.77□□□□□ -1.97
HTTP42858 AL162233.1-201ENST00000620014 944 ntBASIC2.77□□□□□ -1.97
HTTP42858 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.77□□□□□ -1.97
HTTP42858 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HTTP42858 RN7SKP282-201ENST00000516824 299 ntBASIC2.77□□□□□ -1.97
HTTP42858 RANP3-201ENST00000530970 276 ntBASIC2.77□□□□□ -1.97
HTTP42858 AP003117.2-201ENST00000606010 545 ntBASIC2.77□□□□□ -1.97
HTTP42858 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms