Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCLP35914 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCLP35914 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC111188.2-201ENST00000529697 1387 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HMGCLP35914 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 RNU6-575P-201ENST00000411326 105 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 MTND4P22-201ENST00000413116 1169 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AL049610.1-201ENST00000423374 372 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 MTCO2P23-201ENST00000425216 680 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCLP35914 AP000893.1-201ENST00000474462 794 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 RN7SKP13-201ENST00000515933 244 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 SNORA70.18-201ENST00000516696 98 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 DEFB130C-202ENST00000530001 230 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AC103843.2-201ENST00000530523 682 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCLP35914 AC004217.3-201ENST00000551552 878 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 MIR4738-201ENST00000579134 87 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCLP35914 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 AC073387.2-201ENST00000604797 784 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AC027449.1-201ENST00000608890 407 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AL138478.1-201ENST00000612252 832 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCLP35914 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HMGCLP35914 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
HMGCLP35914 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HMGCLP35914 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCLP35914 MFSD8-233ENST00000641482 4860 ntBASIC3.53□□□□□ -1.85
HMGCLP35914 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
HMGCLP35914 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HMGCLP35914 SGO1P1-201ENST00000603525 1447 ntBASIC3.53□□□□□ -1.85
HMGCLP35914 AL365440.1-201ENST00000436135 2167 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCLP35914 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 RNA5SP235-201ENST00000365411 114 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 MTCO3P31-201ENST00000405526 789 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 OR51A3P-201ENST00000413596 924 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC234782.4-201ENST00000417646 1048 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCLP35914 SFR1P2-201ENST00000421841 730 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCLP35914 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 RPL21P110-201ENST00000433345 446 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 GTF2IP3-201ENST00000433887 494 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 MTCYBP31-201ENST00000438855 1122 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 MTCYBP42-201ENST00000444653 1130 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AL031313.1-201ENST00000448435 256 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HMGCLP35914 RBMY2UP-201ENST00000453474 324 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC091564.1-201ENST00000464563 479 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 AC113420.1-201ENST00000507903 571 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC005921.1-201ENST00000510589 286 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 HMGB1P1-201ENST00000522557 636 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 OR4A2P-201ENST00000527276 913 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCLP35914 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 AC026333.2-201ENST00000542164 106 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCLP35914 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCLP35914 DUXAP6-201ENST00000553858 601 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCLP35914 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCLP35914 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCLP35914 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCLP35914 AL160237.3-201ENST00000604114 1013 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC009948.4-201ENST00000604692 675 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCLP35914 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AL592295.2-201ENST00000612578 206 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC243756.2-201ENST00000618406 463 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AL121895.2-201ENST00000619558 447 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 AC123767.1-202ENST00000620407 817 ntBASIC3.52□□□□□ -1.85
HMGCLP35914 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms