Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC079776.3-201ENST00000450665 370 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 FABP3P2-201ENST00000453169 399 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 SNRPGP5-201ENST00000456003 220 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 RPL5P24-201ENST00000463742 885 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC007537.2-201ENST00000472093 511 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC006517.1-201ENST00000480485 328 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 GAPDHP36-201ENST00000480688 918 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 RPL21P129-201ENST00000491732 478 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
HOXA11P31270 WBP1LP4-201ENST00000505043 344 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC116353.3-201ENST00000511215 249 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC010625.1-201ENST00000511296 403 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA11P31270 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC008837.2-201ENST00000513076 418 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC018797.3-201ENST00000513388 1241 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 HNRNPKP5-201ENST00000515300 253 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 RNA5SP179-201ENST00000517284 121 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC044913.1-201ENST00000557200 430 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC027807.1-201ENST00000559921 996 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 MIR3158-1-201ENST00000583596 81 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC107982.3-201ENST00000584957 985 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC005255.1-201ENST00000593748 216 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 VN1R82P-201ENST00000601481 356 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AL451044.1-201ENST00000604867 238 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC245389.1-201ENST00000605141 529 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA11P31270 AP005137.2-201ENST00000609238 400 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 C2orf27A-204ENST00000623058 969 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA11P31270 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA11P31270 AC025263.3-201ENST00000622965 1396 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 AC092104.1-201ENST00000497346 1441 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HOXA11P31270 LINC01355-201ENST00000566551 5444 ntBASIC4.35□□□□□ -1.71
HOXA11P31270 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA11P31270 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA11P31270 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA11P31270 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA11P31270 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA11P31270 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
HOXA11P31270 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA11P31270 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA11P31270 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 XIAPP3-201ENST00000312918 795 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RNU6-621P-201ENST00000364752 109 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA11P31270 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXA11P31270 MTCO3P41-201ENST00000414801 328 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RPL7P44-201ENST00000424827 742 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 MTCO1P3-201ENST00000429327 192 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 MTND4P6-201ENST00000438297 472 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RPS24P1-201ENST00000438550 371 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 RPL23AP76-201ENST00000441860 458 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 Z95327.1-201ENST00000446082 482 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 RN7SL585P-201ENST00000470538 280 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 SETP11-201ENST00000473027 690 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC021146.8-201ENST00000507455 733 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC104108.1-201ENST00000509930 412 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AF213884.2-201ENST00000510417 903 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC079395.1-201ENST00000510981 262 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RPL7L1P13-201ENST00000511702 739 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RNU6-352P-201ENST00000516908 107 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RNU1-45P-201ENST00000517191 141 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 RN7SKP283-201ENST00000517197 270 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXA11P31270 AC092747.2-201ENST00000545069 983 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 CENPUP2-201ENST00000555897 1186 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC022968.1-201ENST00000567372 442 ntBASIC4.34□□□□□ -1.71
HOXA11P31270 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA11P31270 VN1R88P-201ENST00000596787 292 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms