Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CDH12P3-201ENST00000517935 295 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 CDH12P1-201ENST00000518435 295 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 RAB9BP1-201ENST00000519581 626 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC139103.1-201ENST00000534696 1030 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC006557.5-201ENST00000603126 811 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC011374.2-201ENST00000607135 526 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC091046.2-201ENST00000620775 665 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC022509.4-201ENST00000621404 572 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DMAP28067 AC092447.7-201ENST00000422212 1621 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DMAP28067 ZNF807-201ENST00000328088 1707 ntBASIC2.85□□□□□ -1.95
HLA-DMAP28067 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 ZNF734P-201ENST00000419494 1534 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 SNORD9-201ENST00000362566 104 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 SNORD51.1-201ENST00000365405 77 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 RNA5SP283-201ENST00000365604 119 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 DSTNP4-201ENST00000399472 474 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 VTA1P1-201ENST00000414044 866 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 RAD23BP2-201ENST00000416003 1207 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 MTCO3P12-201ENST00000416718 547 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC012065.2-201ENST00000421295 375 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 EIF2S2P3-201ENST00000428356 999 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 CEACAMP9-201ENST00000442990 513 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 GSTA11P-201ENST00000452866 669 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 HMGB1P25-201ENST00000468402 607 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 GAPDHP39-201ENST00000481866 979 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 OR9N1P-202ENST00000494289 481 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC008885.2-201ENST00000509506 930 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC026402.1-201ENST00000513642 170 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 SNORA31.1-201ENST00000515993 133 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 SNORA31.5-201ENST00000516190 133 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC007991.1-201ENST00000522680 631 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC093014.1-201ENST00000548926 724 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 CR383656.14-201ENST00000551951 406 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AGGF1P6-201ENST00000569213 976 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AL451086.1-201ENST00000605596 223 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AL450270.1-201ENST00000606160 391 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC004775.1-201ENST00000607389 753 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC092354.2-201ENST00000607786 514 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC104307.1-201ENST00000616142 196 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 MIR6875-201ENST00000617506 72 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC018755.4-201ENST00000619715 454 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 SNORD39.4-201ENST00000620099 78 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AL118508.4-201ENST00000624142 1176 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 AC090897.3-201ENST00000636973 1157 ntBASIC2.84□□□□□ -1.95
HLA-DMAP28067 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DMAP28067 MTND4P8-201ENST00000514997 1362 ntBASIC2.84□□□□□ -1.96
HLA-DMAP28067 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HLA-DMAP28067 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DMAP28067 AC046144.1-201ENST00000478559 1853 ntBASIC2.84□□□□□ -1.96
HLA-DMAP28067 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms