Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 C8orf59P2-201ENST00000603441 271 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AL137072.1-201ENST00000603444 466 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC091167.4-201ENST00000605079 184 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC128687.2-201ENST00000609657 566 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 LRRC77P-213ENST00000637727 880 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 MTND5P26-201ENST00000426018 1752 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
POLR2AP24928 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR2AP24928 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR2AP24928 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 CR383658.2-201ENST00000547576 1525 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR2AP24928 OR4G2P-201ENST00000328113 903 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 Y_RNA.61-201ENST00000362835 102 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 Y_RNA.813-201ENST00000364639 102 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 MIR525-201ENST00000384978 85 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 PTMAP5-201ENST00000393073 333 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 RPL17P12-201ENST00000413391 526 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR2AP24928 AC093084.1-201ENST00000424233 687 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 ATP5F1P1-201ENST00000433775 569 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 USP9YP35-201ENST00000435696 412 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AC241584.1-201ENST00000438469 1241 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 CYCSP32-201ENST00000440548 321 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AC116337.2-201ENST00000477662 156 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AC135999.1-201ENST00000478962 479 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AL358832.1-201ENST00000497800 389 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR2AP24928 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR2AP24928 RPS3AP4-201ENST00000555161 764 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR2AP24928 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR2AP24928 AC103881.1-201ENST00000603476 538 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR2AP24928 AL390208.1-201ENST00000605885 644 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 RNU1-30P-201ENST00000606575 163 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AL354760.1-201ENST00000608357 643 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AC013476.2-201ENST00000614456 459 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 OR5H6-203ENST00000642105 978 ntBASIC4.77□□□□□ -1.65
POLR2AP24928 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
POLR2AP24928 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.77□□□□□ -1.65
POLR2AP24928 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 SNORA72.1-201ENST00000363485 129 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 Y_RNA.303-201ENST00000364998 94 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 OR52E6-202ENST00000379946 954 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 NCSTNP1-201ENST00000406229 144 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 SNORA3.3-201ENST00000408712 125 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 SYF2P2-201ENST00000417620 583 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC092427.1-201ENST00000439177 601 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 AL034418.1-201ENST00000448675 860 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 RNA5SP269-201ENST00000459032 137 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 RPL7P24-201ENST00000493052 752 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC111193.1-201ENST00000504097 155 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 IGHV3-63-201ENST00000518422 341 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 HSPE1P5-201ENST00000561489 272 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC006960.3-201ENST00000561845 705 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 AC006840.1-201ENST00000623069 542 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC022140.2-201ENST00000623500 188 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
POLR2AP24928 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.76□□□□□ -1.65
POLR2AP24928 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR2AP24928 RNA5SP51-201ENST00000364750 119 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
POLR2AP24928 RNU6-253P-201ENST00000384730 105 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 RNA5SP105-201ENST00000391123 113 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 RN7SKP56-201ENST00000410513 331 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 RNA5SP498-201ENST00000411342 120 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 Z92545.1-201ENST00000411782 234 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AL161631.1-201ENST00000417933 486 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR2AP24928 RPS3AP46-201ENST00000448352 682 ntBASIC4.76□□□□□ -1.65
POLR2AP24928 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms