Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 AC000367.1-201ENST00000452711 1766 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 DCAF13P3-201ENST00000561147 1334 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXD4P09016 RNU6-525P-201ENST00000363685 104 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 SNORA40.2-201ENST00000390847 128 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 RN7SKP156-201ENST00000410308 342 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 RNU6-575P-201ENST00000411326 105 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 ELOCP9-201ENST00000418624 239 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD4P09016 Z97055.1-201ENST00000419730 712 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 OR5AW1P-201ENST00000426334 1006 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD4P09016 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD4P09016 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD4P09016 MTATP6P26-201ENST00000445926 662 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXD4P09016 MTCYBP11-201ENST00000447254 1109 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 snoU13.24-201ENST00000458998 104 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 PRDX3P4-201ENST00000470828 747 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC104689.1-201ENST00000473356 768 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AP000893.1-201ENST00000474462 794 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXD4P09016 KRT19P6-201ENST00000510983 209 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC119751.5-201ENST00000514077 770 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 RN7SKP283-201ENST00000517197 270 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC023632.1-201ENST00000518463 375 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 DUXAP2-201ENST00000519198 589 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD4P09016 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD4P09016 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 AC023050.2-201ENST00000544968 387 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC044913.1-201ENST00000557200 430 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 VN1R88P-201ENST00000596787 292 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 AC022079.1-201ENST00000621546 602 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AP002782.1-201ENST00000623107 614 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AP003485.2-201ENST00000623636 610 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 AC092608.3-201ENST00000625017 386 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 CU459211.1-201ENST00000635667 749 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 RIOK3P1-201ENST00000418778 1528 ntBASIC3.54□□□□□ -1.84
HOXD4P09016 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD4P09016 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD4P09016 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD4P09016 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD4P09016 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HOXD4P09016 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXD4P09016 OR4A15-201ENST00000314706 1035 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 OR1L1-202ENST00000373686 1083 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 MIR30B-201ENST00000384850 88 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC119751.3-201ENST00000399720 670 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 ERHP2-201ENST00000402323 299 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 MTCO2P31-201ENST00000402702 684 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC107081.1-201ENST00000414975 361 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD4P09016 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 RPF2P1-201ENST00000424137 906 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD4P09016 AC083863.1-201ENST00000438811 231 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 RPS11P1-201ENST00000451072 473 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC233982.1-201ENST00000451247 436 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 MTCO3P16-201ENST00000454456 754 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC004263.1-201ENST00000479327 332 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC084024.2-201ENST00000503480 791 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC006499.5-201ENST00000505037 514 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC110792.2-201ENST00000510278 224 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC026726.1-201ENST00000512859 601 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC008494.2-201ENST00000514544 370 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 RNA5SP309-201ENST00000516670 106 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC026403.1-201ENST00000518938 295 ntBASIC3.53□□□□□ -1.84
HOXD4P09016 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD4P09016 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms