Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC068533.1-201ENST00000418542 415 ntBASIC4.23□□□□□ -1.73
RB1P06400 ELOCP9-201ENST00000418624 239 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL591419.1-201ENST00000427423 339 ntBASIC4.23□□□□□ -1.73
RB1P06400 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 AC104073.1-201ENST00000451988 151 ntBASIC4.23□□□□□ -1.73
RB1P06400 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 RPL21P11-201ENST00000461458 483 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL133162.1-201ENST00000463228 453 ntBASIC4.23□□□□□ -1.73
RB1P06400 FTH1P9-201ENST00000513251 355 ntBASIC4.23□□□□□ -1.73
RB1P06400 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 RN7SKP31-201ENST00000516354 278 ntBASIC4.23□□□□□ -1.73
RB1P06400 RNU6-352P-201ENST00000516908 107 ntBASIC4.23□□□□□ -1.73
RB1P06400 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 AC005412.1-201ENST00000580812 1049 ntBASIC4.23□□□□□ -1.73
RB1P06400 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 BNIP3P26-201ENST00000600827 554 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 AL451044.1-201ENST00000604867 238 ntBASIC4.23□□□□□ -1.73
RB1P06400 AC013244.3-201ENST00000605614 388 ntBASIC4.23□□□□□ -1.73
RB1P06400 U3.45-201ENST00000607547 219 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 AL139089.1-201ENST00000620372 975 ntBASIC4.23□□□□□ -1.73
RB1P06400 C2orf27A-204ENST00000623058 969 ntBASIC4.23□□□□□ -1.73
RB1P06400 AC004943.3-201ENST00000624116 600 ntBASIC4.23□□□□□ -1.73
RB1P06400 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.23□□□□□ -1.73
RB1P06400 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RB1P06400 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
RB1P06400 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 AC011266.1-201ENST00000624119 3569 ntBASIC4.22□□□□□ -1.73
RB1P06400 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 AC008725.1-201ENST00000605123 2263 ntBASIC4.22□□□□□ -1.73
RB1P06400 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 Y_RNA.25-201ENST00000362528 102 ntBASIC4.22□□□□□ -1.73
RB1P06400 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RB1P06400 U1.1-201ENST00000384101 164 ntBASIC4.22□□□□□ -1.73
RB1P06400 RNU6-356P-201ENST00000384140 107 ntBASIC4.22□□□□□ -1.73
RB1P06400 MIR506-201ENST00000384998 124 ntBASIC4.22□□□□□ -1.73
RB1P06400 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RB1P06400 RPS29P4-201ENST00000414733 161 ntBASIC4.22□□□□□ -1.73
RB1P06400 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 AC073335.1-201ENST00000427776 363 ntBASIC4.22□□□□□ -1.73
RB1P06400 CYCSP43-201ENST00000438233 310 ntBASIC4.22□□□□□ -1.73
RB1P06400 MTCO2P25-201ENST00000447065 681 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC104978.1-201ENST00000449387 391 ntBASIC4.22□□□□□ -1.73
RB1P06400 PPIAP3-201ENST00000450588 505 ntBASIC4.22□□□□□ -1.73
RB1P06400 PLGLA-201ENST00000465668 449 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC106707.2-201ENST00000484182 374 ntBASIC4.22□□□□□ -1.73
RB1P06400 RPS6P4-201ENST00000494693 758 ntBASIC4.22□□□□□ -1.73
RB1P06400 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.22□□□□□ -1.73
RB1P06400 TMEM248P1-201ENST00000510579 951 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.22□□□□□ -1.73
RB1P06400 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.22□□□□□ -1.73
RB1P06400 OR4A12P-201ENST00000530847 918 ntBASIC4.22□□□□□ -1.73
RB1P06400 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 AL389895.1-201ENST00000554127 252 ntBASIC4.22□□□□□ -1.73
RB1P06400 AL132657.2-201ENST00000564417 358 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC022662.1-201ENST00000580252 331 ntBASIC4.22□□□□□ -1.73
RB1P06400 OR4G1P-201ENST00000588632 938 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 AC091057.2-201ENST00000602594 792 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC007349.4-201ENST00000608114 532 ntBASIC4.22□□□□□ -1.73
RB1P06400 AC015813.4-201ENST00000610469 179 ntBASIC4.22□□□□□ -1.73
RB1P06400 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
RB1P06400 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
RB1P06400 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.22□□□□□ -1.73
RB1P06400 PABPC1P7-201ENST00000413177 1513 ntBASIC4.21□□□□□ -1.73
RB1P06400 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RB1P06400 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RB1P06400 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.21□□□□□ -1.73
RB1P06400 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.21□□□□□ -1.74
RB1P06400 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RB1P06400 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RB1P06400 Y_RNA.192-201ENST00000363977 102 ntBASIC4.21□□□□□ -1.74
RB1P06400 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.21□□□□□ -1.74
RB1P06400 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RB1P06400 Y_RNA.408-201ENST00000383987 102 ntBASIC4.21□□□□□ -1.74
RB1P06400 Y_RNA.465-201ENST00000384293 102 ntBASIC4.21□□□□□ -1.74
RB1P06400 VN1R8P-201ENST00000407739 893 ntBASIC4.21□□□□□ -1.74
RB1P06400 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.21□□□□□ -1.74
RB1P06400 AL035423.1-201ENST00000420331 213 ntBASIC4.21□□□□□ -1.74
RB1P06400 AC092832.1-201ENST00000422934 400 ntBASIC4.21□□□□□ -1.74
RB1P06400 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RB1P06400 USP9YP11-201ENST00000427537 717 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms