Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-610P-201ENST00000384264 107 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 SNORA51.12-201ENST00000384448 134 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RNU6-1151P-201ENST00000384684 107 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC241520.1-201ENST00000422654 1099 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 OR51AB1P-201ENST00000429046 620 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL512637.2-201ENST00000431287 1256 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 ATP5JP1-201ENST00000431631 322 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RPL21P110-201ENST00000433345 446 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 Z77249.1-201ENST00000444622 1175 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RPL21P23-201ENST00000446654 460 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 SNRPGP5-201ENST00000456003 220 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC008379.1-201ENST00000463655 464 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RPL21P18-201ENST00000469899 480 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC012170.1-201ENST00000495139 359 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 TMEM248P1-201ENST00000510579 951 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 HMGN1P15-201ENST00000513870 295 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 OR4R2P-201ENST00000530815 597 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC011611.5-201ENST00000552477 578 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC074029.1-201ENST00000552531 1044 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 MIR4789-201ENST00000577469 82 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC245389.1-201ENST00000605141 529 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AP005229.2-201ENST00000609980 697 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 MIR7851-201ENST00000610611 160 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL713922.2-201ENST00000619384 716 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC106730.3-201ENST00000624568 641 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AL392088.2-201ENST00000637607 285 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 MTCO1P6-201ENST00000481192 1384 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 AC025263.3-201ENST00000622965 1396 ntBASIC2.96□□□□□ -1.94
HLA-DPB1P04440 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPB1P04440 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 ZNF849P-201ENST00000594711 1566 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 CR383658.2-201ENST00000547576 1525 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RNU4-35P-201ENST00000362588 141 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RNU6-1243P-201ENST00000364028 107 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 MIR525-201ENST00000384978 85 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 BTBD10P2-201ENST00000404779 676 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC069157.1-201ENST00000421749 137 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC092832.1-201ENST00000422934 400 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL009174.1-201ENST00000426577 416 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 DEFB130D-201ENST00000426866 237 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 USP9YP31-201ENST00000431405 881 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC010881.1-201ENST00000433830 235 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC009969.1-201ENST00000438726 172 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RPL6P5-201ENST00000445678 828 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RNU7-140P-201ENST00000459546 60 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AP000873.1-201ENST00000463987 400 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 PTGES3P3-201ENST00000511479 482 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC093755.1-201ENST00000512950 1023 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 PRELID3BP4-201ENST00000515476 571 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 RNA5SP309-201ENST00000516670 106 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AP001207.2-201ENST00000519490 539 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 UBE2NP1-201ENST00000545592 458 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPB1P04440 MIR4504-201ENST00000577413 92 ntBASIC2.95□□□□□ -1.94
HLA-DPB1P04440 AC015917.1-201ENST00000579654 510 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms